Information about 11293044_51_238

Unaligned length: 188

Alignment length: 716

Description in the alignment: single domain, from Planctomyces brasiliensis DSM 5305

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

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Sequence

>11293044_51_238
ATVLFDGSDLSNFNGGDGWTVEDGVMTAGGKGGVTTKQKFGDCQLHIEWASPSEVKSQGQ
GRGNSGVYFMDKYEVQILDSYDNETYFDGQCASIYKQYPPLVNATRPPGEWQTYDIIFTA
PRFYDDGSLKSPAYFTVIHNGVVVQNHVELQGGTFWHKPPEYNKHDLTGPISLQNHGNPV
RFRNIWVR

Aligned sequence

>11293044_51_238
------------------------------------------------------------
------------------------------------------------------------
---------------------------------A--TVLF-D-GS--DL-SN-------F
N---GG---------DGW------------------------------------TVED-G
---------------------------VMT--------------------------AGGK
G-GVTT-----K-----Q--KF-G-DCQLHIEWA----------------SP-SEVKSQ-
-------------------GQGRGNSGVYFMDK---------------------------
---------------Y-EVQILD------SYDN--------------------ETYFDGQ
CASIY----------------------------------------------KQYP-----
---PL--VNATRPPGEWQTYDI--IF-T-APRFYDDGS---LKSPAYFT--V-IHN-GVV
VQNHVELQGGTFWHKPPE-------------------YNKHDLTGPISLQ--NHG-----
-------N--------------------PVR--FRNIWVR----------------

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