Sites on a Tree

 

Information about 2221983_152_318

Unaligned length: 167

Alignment length: 716

Description in the alignment: single domain, from Solibacter usitatus Ellin6076

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>2221983_152_318
TGWIVKEGAMASTGSGRGVIYTAQDYSRYRLMFTMRHVSGNPDHQACVLIFCTRPQGDEK
PLDALAGIQFQVPNGGHWDYRPGMNNSGGTEFTSVNKPRFDIHGWSRVEILADAALGVAR
MAVAQPPGAQAVEVLDFKDPSAGKVGPIAWQMHNAGLFDEYKDVTIE

Aligned sequence

>2221983_152_318
------------------------------------------------------------
------------------------------------------------------------
--------------------------------TG--------------------------
-----------------W------------------------------------IVKE-G
---------------------------AMA------------------------STGSGR
G-VIYT-----A-----Q--DY-S-RYRLMFTMR----------------HV-SGNP---
----------------------DHQACVLIFCTR-------------------------P
QGDEKP---LDALAGI-QFQVPN------GGHWD------------------YRPGMNNS
GGTEF-------------------------------------------------T-----
---SV--NKPRFDIHGWSRVEI--LA-D-AALGVA--------RMAVAQ-PP-GAQ-AVE
VLDFKDPSAG--------------------------------KVGPIAWQ--MHN-----
-------A--------------------GLFDEYKDVTIE----------------

Back to tree

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory