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Information about 2223539_22_227

Unaligned length: 206

Alignment length: 716

Description in the alignment: single domain, from Solibacter usitatus Ellin6076

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>2223539_22_227
GYTALFNGKDLSGWRGRQGTYSPHAEALLSKEELAAKQQQWNAERDLHWSVDVAKGEIVS
DGKSVHLATARDYRDFDLYVDWLMVKHNGDSGIYLRSYPQVQIWDVDNPREVKNGAPRGS
GALWNNNDDNPGKWPLVKADNPVGAWNTFRIKMAGSRVSVWLNGKLTVDNQVLDNFYNRS
LPLVPKGAIELQTHGSEIRFRNIYIK

Aligned sequence

>2223539_22_227
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GYTALF-N-GK--DL-SG-------W
R---GRQGTYS---PHAEALLSKEELAAKQ-----------QQWNAERDLHWSVDVAK-G
---------------------------EIV-------------------------SDGKS
V-HLAT-----A-----R--DY-R-DFDLYVDWLM---------------VKHNG-----
------------------------DSGIYLRSY---------------------------
---------------P-QVQIWD------VDNPRE-----------------VKNGAPRG
SGALWNN------------------------------------------ND--DNPG---
-KWPL--VKADNPVGAWNTFRI--KM-A-GSR---------------VS--V-WLN-GKL
TVDNQVLDNFYNRSLP------------------------LVPKGAIELQ--THG-----
-------S--------------------EIR--FRNIYIK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory