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Information about 2760313_39_201

Unaligned length: 163

Alignment length: 716

Description in the alignment: tandem domain, from Blastopirellula marina DSM 3645

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>2760313_39_201
GWLLLFDGETTFGWKSEGKIDWTVDQGVIRATKGDVGQLRTTTQFANYELHVDFRAPAET
NSAIFLRTSPKPESPTYGCYELNIAPESNSYPTGSLVGRMKVTPPCVADQWHSFDVTADQ
GTIVVKLDGAEVLKYEDPQYVGLGFIGLQHNQGEIEFRNVKLK

Aligned sequence

>2760313_39_201
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWLLLF-D-GE--TT-FG-------W
K---SEGK-------IDW------------------------------------TVDQ-G
---------------------------VIR------------------------ATKGDV
G-QLRT-----T-----T--QF-A-NYELHVDFRA---------------PA-ET-----
------------------------NSAIFLRTS---------------------------
--PKPE---SPTYGCY-ELNIAP------ESNS-------------------------YP
TGSLVG------------------------------------------------R-----
---MK--VTPPCVADQWHSFDV--TA-D-QGT---------------IV--V-KLD-GAE
VLKYEDPQYV--------------------------------GLGFIGLQ--HNQ-----
-------G--------------------EIE--FRNVKLK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory