Sites on a Tree

 

Information about 2761067_1173_1341

Unaligned length: 169

Alignment length: 716

Description in the alignment: with redox domain, from Blastopirellula marina DSM 3645

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>2761067_1173_1341
ELFNGQDLNGWNGDRNLWSVENGEIVGKTLTGIPANSFLISDLAAANFRLKLEIRLVKNE
GNSGIQFRSNALPGGSVQGYQADAGAGWWGKLYEEHGRGLLWVKSGEEHLKPGDWNQYEI
VAQGNQVKTFLNGQPCVDLHDDKGVKQGVFALQLHSGGPTEVRFRHLQL

Aligned sequence

>2761067_1173_1341
------------------------------------------------------------
------------------------------------------------------------
---------------------------------E----LF-N-GQ--DL-NG-------W
N---GD--------RNLW------------------------------------SVEN-G
---------------------------EIV--------------------GKTLTGIPAN
S-FLIS-----D-----L--AA-A-NFRLKLEIRL---------------VKNEG-----
------------------------NSGIQFRSN---------------------------
---ALP---GGSVQGY-QADAGA-----------------------------------GW
WGKLYEE------------------------------------------HGR--GLL---
-WVKS--GEEHLKPGDWNQYEI--VA-Q-GNQ---------------VK--T-FLN-GQP
CVDLHDDKGV--------------------------------KQGVFALQ--LHSG----
-----GPT--------------------EVR--FRHLQ--L---------------

Back to tree

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory