Sites on a Tree

 

Information about 2764129_27_207

Unaligned length: 181

Alignment length: 716

Description in the alignment: single domain, from Blastopirellula marina DSM 3645

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>2764129_27_207
GWVSLTDGKSFDGWKINENEKAWSIKDGAFVAKGSRSHLFYVGDDKPFKNFILNLKVMTK
NNSNGGVYIHTKYQDENWPKQGFECQVNNSYNSDPRKTASLYAVKDVAEAPAGDDEYFDY
TIEVKDKTVKLSINGKLVNEYTEPADAEAGKDFTRVFDKGTFALQAHDPGSTVYYKDIRV
K

Aligned sequence

>2764129_27_207
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWVSLT-D-GK--SF-DG-------W
K---INENE------KAW------------------------------------SIKD-G
---------------------------AFV------------------------AKGSRS
H-LFYV-----GD---DK--PF-K-NFILNLKVMT---------------KN-NS-----
------------------------NGGVYIHTK---------------------------
--YQDE---NWPKQGF-ECQVNN------SYNS-----------------------DPRK
TASLY-----------------------------------------------AVK-----
---DV--AEAPAGDDEYFDYTI--EV-K-DKT---------------VK--L-SIN-GKL
VNEYTEPADAEAGKDFT----------------------RVFDKGTFALQ--AHDP----
------GS--------------------TVY--YKDIRVK----------------

Back to tree

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory