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Information about 3558251_5_190

Unaligned length: 186

Alignment length: 716

Description in the alignment: single domain, from Pseudomonas stutzeri A1501

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>3558251_5_190
ATQWRAWHGDDFPEGSWYRDEEQLCAIVGAPRIDLISRERYANFILRFEYALPVGGNSGV
FYRVDEAAELAWHSGPEMQLLDDAVHPDGAEPTTRNGALYGLRATQQETPIEPGSFMEGA
LVVRDADVEHWLDNRMVLSYRLDDPDLRMQIRTSKFADKPLYAQATAGHIVLQHHGEAVR
FRRLSI

Aligned sequence

>3558251_5_190
------------------------------------------------------------
------------------------------------------------------------
---------------------------------A----------------TQ-------W
R---AWHGDDF--PEGSW------------------------------------YRDE-E
---------------------------QLC-----------------------AIVGAPR
I-DLIS-----R-----E--RY-A-NFILRFEYAL---------------PV-GG-----
------------------------NSGVFYRVD---------------------------
--EAAE---LAWHSGP-EMQLLD------DAVHP------------------DGAEPTTR
NGALY----------------------------------------------GLRA-----
---TQ--QETPIEPGSFMEGAL--VV-R-DAD---------------VE--H-WLD-NRM
VLSYRLDDPDLRMQIRTSKFA-------------DKPLYAQATAGHIVLQ--HHG-----
-------E--------------------AVR--FRRLSI-----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory