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Information about 3722681_42_255

Unaligned length: 214

Alignment length: 716

Description in the alignment: single domain, near sugar dehydrogenase, from Parabacteroides distasonis ATCC 8503

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>3722681_42_255
GYTLLFNGKDFTGWKMFNGGDVKGWQVEDGVIVGYGNGGDVIADTTIKVSTDIVTVKNYH
NFQIKWDWKIGAQGNSGFLYHVQEGPKYKAPFETGPEYQLIDDDNYPWVSETGKEGLEDW
QKTGCNYAMYVPETKQVNPPGEWNSSMVLYKDGYVEHWLNGEKLFSFQEGSEDWKMRRYS
GKWEAFPDYGISTTGKLCFQDHGSKVYFKNVKIK

Aligned sequence

>3722681_42_255
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GYTLLF-N-GK--DF-TG-------W
K---MFNGGDV---K-GW------------------------------------QVED-G
---------------------------VIVGYGN-------------GGDVIADTTIKVS
T-DIVT-----V-----K--NY-H-NFQIKWDWKI---------------GA-QG-----
------------------------NSGFLYHVQ---------------------------
EGPKYK---APFETGP-EYQLID------DDNYPWVSE-----------TGKEGLEDWQK
TGCNY----------------------------------------------AMYV-----
---PE--TKQVNPPGEWNSSMV--LY-K-DGY---------------VE--H-WLN-GEK
LFSFQEGSEDWKMRRYSGKWE-------------AFPDYGISTTGKLCFQ--DHG-----
-------S--------------------KVY--FKNVKIK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory