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Information about 3723284_29_221

Unaligned length: 193

Alignment length: 716

Description in the alignment: single domain, from Parabacteroides distasonis ATCC 8503

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>3723284_29_221
YRPLFDKDLSNADYDSSVWTFKNGILTATADQSIWTKVQYENFILDLEFKTDVNTNSGVV
IYCTDKGNWIPSSIEIQIADDHHPEWQSYPEYWRCGSIYGHKGANEQLVVKKPGEWNRMI
ITAKGQQIDIELNGKHIVSANLADWTSGTTNPDGTEIPEWLPIPYANMPTKGYIGLQGKH
GESNIWFRNIQLK

Aligned sequence

>3723284_29_221
------------------------------------------------------------
------------------------------------------------------------
---------------------------------Y--RPLF-D--K--DL-SN-------A
D---Y-----D---SSVW------------------------------------TFKN-G
---------------------------ILT--------------------------ATAD
Q-SIWT-----K-----V--QY-E-NFILDLEFKT---------------DV-NT-----
------------------------NSGVVIYCT---------------------------
---DKG---NWIPSSI-EIQIAD------DHHPEW-----------------QSYPEYWR
CGSIYG---------------------------------------------HKGA-----
---NE--QLVVKKPGEWNRMII--TA-K-GQQ---------------ID--I-ELN-GKH
IVSANLADWTSGTTNPDGTEIPE---------WLPIPYANMPTKGYIGLQ-GKHG-----
------ES--------------------NIW--FRNIQLK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory