Sites on a Tree

 

Information about 3723687_51_268

Unaligned length: 218

Alignment length: 716

Description in the alignment: single domain, from Parabacteroides distasonis ATCC 8503

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>3723687_51_268
EWITMFDGKTLNGWRGYCRQDVPLGWVVEDGSITYKGSDNKADTGFGDLIYDKKFKNFVF
EIEWKIDKAGNSGIFYTAQEIEGTPIYYSSPEYQLLDNENMPDAWEGCDGNRQAGAVYDM
IMPDPQPVKPYGNWNKTRIVVYNQRVIHYMNDVKILEFQFGTPVWRALVDHSKFSKFSTS
PEKCPEAYDLMLQCGKQPGYIGMQDHGYGVCFRNIRIK

Aligned sequence

>3723687_51_268
------------------------------------------------------------
------------------------------------------------------------
----------------------------------EWITMF-D-GK--TL-NG-------W
R---GYCRQDV---PLGW------------------------------------VVED-G
---------------------------SITY------------------KGSDNKADTGF
G-DLIY-----D-----K--KF-K-NFVFEIEWKI---------------DK-AG-----
------------------------NSGIFYTAQ---------------------------
-EIEGT---PIYYSSP-EYQLLD------NENMPDA---------------WEGCDGNRQ
AGAVYDM------------------------------------------IM---------
---PD--PQPVKPYGNWNKTRI--VV-Y-NQR---------------VI--H-YMN-DVK
ILEFQFGTPVWRALVDHSKFSKFSTSPEKCPEAYDLMLQCGKQPGYIGMQ--DHG-----
-------Y--------------------GVC--FRNIRIK----------------

Back to tree

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory