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Information about 4595334_71_236

Unaligned length: 166

Alignment length: 716

Description in the alignment: tandem domain, from Planctomyces maris DSM 8797

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>4595334_71_236
GWIALFDGHSLSGWKPNNDVNWHVDEGVIKADKGEPGLLLTTSPFADYELKFEFKLTPET
NSGIFLRTTFNPTDPSKDCYELNLCDQKTEFPTGSLVARSKIDKPLPVSSEWQTCEVNLE
GSNIKAIINGKEVLNFNDTSKNLRKTGFIGLQKNEGAIEFRKIYLK

Aligned sequence

>4595334_71_236
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWIALF-D-GH--SL-SG-------W
K---PNND-------VNW------------------------------------HVDE-G
---------------------------VIK------------------------ADKGEP
G-LLLT-----T-----S--PF-A-DYELKFEFKL---------------TP-ET-----
------------------------NSGIFLRTT---------------------------
--FNPT---DPSKDCY-ELNLCD------QKTE-------------------------FP
TGSLVA-----------------------------------------------RS-----
---KI--DKPLPVSSEWQTCEV--NL-E-GSN---------------IK--A-IIN-GKE
VLNFNDTSKNLR------------------------------KTGFIGLQ--KNE-----
-------G--------------------AIE--FRKIYLK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory