Information about 4907078_48_238

Unaligned length: 191

Alignment length: 716

Description in the alignment: single domain, from Gemmata obscuriglobus UQM 2246

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>4907078_48_238
GAVVLFDGKDFSKWVKRDGKSEVKWTLKGGVMEGVKGHGDIITRDVFGGKFKLHVEFRVP
YEPGGSGQGRGNSGVYLQGRYEVQILDSYGLKSGKNDCGAIYGVAAPAVNACKAPTVWQS
YDIEFTPPKVENGKKTEPARMTVSHNGITIHDDVAVTSDNTTSGLGGDISKPGPILLQDH
GHPVQFRNVWL

Aligned sequence

>4907078_48_238
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GAVVLF-D-GK--DF-SK-------W
V---KRDGKS----EVKW------------------------------------TLKG-G
---------------------------VME-------------------------GVKGH
G-DIIT-----R-----D--VF-GGKFKLHVEFRVPY-----------EPG---GSGQ--
---------------------GRGNSGVYLQGR---------------------------
---------------Y-EVQILD------SYGL---------------------KSGKND
CGAIY----------------------------------------------GVAA-----
---PA--VNACKAPTVWQSYDI--EF-T-PPKVENGK----KTEPARMT--V-SHN-GIT
IHDDVAVTSDNTTSGLG---------------------GDISKPGPILLQ--DHG-----
-------H--------------------PVQ--FRNVWL-----------------

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