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Information about 4911453_35_208

Unaligned length: 174

Alignment length: 716

Description in the alignment: single domain, from Gemmata obscuriglobus UQM 2246

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>4911453_35_208
DNWEGRADIWKIDARAKSVTGETKEDPKYNTFLCSKAKYGDFELTCKVRLVNAVGNSGFQ
VRSERFDKEGDKQSFRVRGPQVDIGKGYFGGLYGEGVGGYLLKPKKDAAKPAEVNDYKIV
VKGNHVTVTLNGEVTVDEEFPDNKGKNPAPKDGIIAFQAHAGPPMKVEFTDIKF

Aligned sequence

>4911453_35_208
------------------------------------------------------------
------------------------------------------------------------
---------------------------------D-----------------N-------W
E---GRADIWK--IDARA------------------------------------KSVT-G
---------------------------ETK------------------------EDPKYN
T-FLCS-----K-----A--KY-G-DFELTCKVRL--------------VNA-VG-----
------------------------NSGFQVRSERF------------------------D
KEGDKQ---SFRVRGP-QVDIGK------GYFG--------------------GLYGEGV
GGYLL-------------------------------------------------K-----
---PK--KDA-AKPAEVNDYKI--VV-K-GNH---------------VT--V-TLN-GEV
TVDEEFPDNKGKNPA--------------------------PKDGIIAFQ--AHAG----
-----PPM--------------------KVE--FTDIK--F---------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory