Information about 554434_59_259

Unaligned length: 201

Alignment length: 716

Description in the alignment: single domain, from Pirellula sp. 1

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

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Sequence

>554434_59_259
AAVLFDGSGLDAWKPFSWQWINPNDDQQEVQWKIVDGEAMEIAFEIEGKRRKQFLCTKQT
FGDYQLHLEFQLPDGDSGNSGIFFGPMYELQILNTAGKDRPGLGDCGAIYQIRAPDVNAA
LGPGQWQTVDLEYQAAQIGKNGFMTENGAARVTVRLNGTLIHDDFKLSLRRNKYAAFPEE
PTSPIVLQEHGSKVKFRNIWL

Aligned sequence

>554434_59_259
------------------------------------------------------------
------------------------------------------------------------
--------------------------------AA---VLF-D-GS--GL-DA-------W
K---PFSWQWI---NPNDDQQ-----------------------------EVQWKIVD-G
---------------------------EAME------------------IAFEIEGKRRK
Q-FLCT-----K-----Q--TF-G-DYQLHLEFQLP-------------DGD-SG-----
------------------------NSGIFFGPM---------------------------
---------------Y-ELQILN------TAGK--------------------DRPGLGD
CGAIY----------------------------------------------QIRA-----
---PD--VNAALGPGQWQTVDL--EY-Q-AAQIGKNGFM-TENGAARVT--V-RLN-GTL
IHDDFKLSLRRNKYAAF----------------------PEEPTSPIVLQ--EHG-----
-------S--------------------KVK--FRNIWL-----------------

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