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Information about 556011_250_415

Unaligned length: 166

Alignment length: 716

Description in the alignment: tandem domain, from Pirellula sp. 1

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>556011_250_415
EWSFTKDGVLHGVHSKSQGKDGLVISDDNFDNFIARVTYRMRGGNSALYFRAEETDAPWV
LRGFQNEIANNGKDCALWHTAGIIDGNTIPGRGWIVTNDEFVGKVRNKDDQWNTTCTAAY
GDRLVQTLNGFCTSDIIDEECEKTGKLGLQMHGGTDCEMYFKDFEV

Aligned sequence

>556011_250_415
------------------------------------------------------------
------------------------------------------------------------
------------------------------EWSF--------------------------
-------------------------------------------------------TKD-G
---------------------------VLH--------------------GVHSKSQGKD
G-LVIS-----D-----D--NF-D-NFIARVTYR----------------MR-GG-----
------------------------NSALYFRAE---------------------------
--ETDA---PWVLRGF-QNEIAN------NGKD---------------------CALWHT
AGIIDGNTIP-----------------------------------GRGWIVTNDE-----
---FV--GKVRNKDDQWNTTCT--AA-Y-GDR---------------LV--Q-TLN-GFC
TSDIIDEECE--------------------------------KTGKLGLQ--MHG-----
-------GT-----------------DCEMY--FKDFEV-----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory