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Information about 557204_55_252

Unaligned length: 198

Alignment length: 716

Description in the alignment: single domain, from Pirellula sp. 1

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>557204_55_252
KWETLFDGSNLDAWREYNRDSVTSGWKIEGNALTCISHKDQGDAARGENLITKEKFDAFE
LELDFKVTPAANSGVMFHVVETKKPPYYTGPEIQIQDHKGGHDPQKCGWLYQLYPSETDS
TKPAGEWNHLRVLITPAKCQIEVNGVLYSEFVKGSDDWNERVAKSKFGKWEGFGEPTNGH
ICLQDHNDEVSYRNIRIR

Aligned sequence

>557204_55_252
------------------------------------------------------------
------------------------------------------------------------
----------------------------------KWETLF-D-GS--NL-DA-------W
R---EYNRDSV---TSGW------------------------------------KIEG-N
---------------------------ALTCI-----------------SHKDQGDAARG
E-NLIT-----K-----E--KF-D-AFELELDFKV---------------TP-AA-----
------------------------NSGVMFHVV---------------------------
--ETKK---PPYYTGP-EIQIQD------HKGG----------------------HDPQK
CGWLY----------------------------------------------QLYP-----
---SE--TDSTKPAGEWNHLRV--LI-T-PAK---------------CQ--I-EVN-GVL
YSEFVKGSDDWNERVAKSKFG-------------KWEGFGEPTNGHICLQ--DHN-----
-------D--------------------EVS--YRNIRIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory