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Information about 558057_260_435

Unaligned length: 176

Alignment length: 716

Description in the alignment: tandem domain, from Pirellula sp. 1

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>558057_260_435
ADGLEGWTVREGMEGEYRIDDDGHLVVDGGKQQLETKAVFGDFVMLADYKMDDPKSNSGL
FFRAIPGDEMMGYECQVSNELIDGNPLQPADCGAGGIFRRQDARVVAGEPKRWNSILLVA
EGNHFATWVNGLQVTDIVDTRKADENPRRGLRLEPGSIIVQGHDKTTQATYRQIAV

Aligned sequence

>558057_260_435
------------------------------------------------------------
------------------------------------------------------------
-------------------------------ADG--------------L-EG-------W
T---VREGMEG---E--Y-----------------------------------RIDDD-G
---------------------------HLV-------------------------VDGGK
Q-QLET-----K-----A--VF-G-DFVMLADYKM--------------DDP-KS-----
------------------------NSGLFFRAI---------------------------
-----P---GDEMMGY-ECQVSN------ELIDGN-----------------PLQPADCG
AGGIF-----------------------------------------------RRQ-----
---DA--RVVAGEPKRWNSILL--VA-E-GNH---------------FA--T-WVN-GLQ
VTDIVDTRKADENPRRG----------------------LRLEPGSIIVQ--GHD-----
-------K--------------------TTQATYRQIA--V---------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory