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Information about 5647962_33_212

Unaligned length: 180

Alignment length: 716

Description in the alignment: single domain, from Opitutus terrae PB90-1

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>5647962_33_212
IDAWEFVSPAATSIEAVVTPTADGSWQLAGQPIGYLQTRVSYTNYELHAEWRWTAKPGNA
GILLHIDSGPIDRKTWPRCLQVQTKHSRAGDVLPMAGARFAEPFTSPPDAKTPQLDRQAA
SSEKPAGEWNACDITCREGTVDVCINGVRQNRVSRCVPATGRIGFQFEGAPYELRNVRIE

Aligned sequence

>5647962_33_212
------------------------------------------------------------
------------------------------------------------------------
---------------IDAWEFVSPAATSIEAVVT--------------------------
------------------------------------------------------PTAD-G
---------------------------SWQ------------------------LAGQPI
G-YLQT-----R-----V--SY-T-NYELHAEWRW--------------TAK-PG-----
------------------------NAGILLHID---------------------------
SGPIDR---KTWPRCL-QVQTKH------SRAG----------------------DVLPM
AGARFAEPFTS---------------------------------PPDAKTPQLDR-----
---QA--ASSEKPAGEWNACDI--TC-R-EGT---------------VD--V-CIN-GVR
QNRVSRCVP---------------------------------ATGRIGFQ--FEG-----
-------A--------------------PYE--LRNVRIE----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory