Information about 6000697_153_324

Unaligned length: 172

Alignment length: 716

Description in the alignment: single domain, from Verrucomicrobium spinosum DSM 4136

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

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Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

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Sequence

>6000697_153_324
VTIFNGKDLSGWTLMNPQSDNGWSVVDGVLQNRVEKGKHHGNIRTDKEFEDFNLKLEVRT
QEKSNSGIYLRGIYEVQVAETFGKPLDSHNMGALYSRITPSVAAEKAIGEWQTFDITLVD
RHLTVILNGNTIIDNQPVLGCTGGAITSDETKPGPIYLQGDHTNIDFRNFML

Aligned sequence

>6000697_153_324
------------------------------------------------------------
------------------------------------------------------------
---------------------------------V---TIF-N-GK--DL-SG-------W
T---LMNPQS----DNGW------------------------------------SVVD-G
---------------------------VLQ---------------------NRVEKGKHH
G-NIRT-----D-----K--EF-E-DFNLKLEVRT---------------QE-KS-----
------------------------NSGIYLRGI---------------------------
---------------Y-EVQVAE------TFGK---------------------PLDSHN
MGALY----------------------------------------------SRIT-----
---PS--VAAEKAIGEWQTFDI--TL-V-DRH---------------LT--V-ILN-GNT
IIDNQPVLGCTGGAITS----------------------DETKPGPIYLQ-GDHT-----
----------------------------NID--FRNFM--L---------------

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