Information about 6001914_31_230

Unaligned length: 200

Alignment length: 716

Description in the alignment: single domain, from Verrucomicrobium spinosum DSM 4136

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

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Sequence

>6001914_31_230
WKQWFTDGKLDGFTIVSGTASYKIEDGVLVGTTTEGSPNSFLMSPSFKDFELEFEVKVDD
ALNSGVQVRSHLAKEGDPAPEGAKKPLPAGRLYGPQCEIAINGTAGDFYDEARRGTWWSE
LTQTKDAVRTEAAKAAFKKGEWNQYRIVVKGDHYQSFVNGVKAADFKQPNDPEGHIGFQV
HGIKKGTGPFSVRWKNVKIR

Aligned sequence

>6001914_31_230
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------WKQWFTD-GK---L-DG-------F
T---IVSGTAS---Y---------------------------------------KIED-G
---------------------------VLV---------------------GTTTEGSPN
S-FLMS-----P--------SF-K-DFELEFEVKV---------------DD-AL-----
------------------------NSGVQVRSHLAKEGD----------------PAPEG
AKKPLP---AGRLYGP-QCEIAI------N----------------------------GT
AGDFYDEARRGTW-----------------------------WSELTQTKDAVRT-----
---EA--AKAAFKKGEWNQYRI--VV-K-GDH---------------YQ--S-FVN-GVK
AADFKQPND---------------------------------PEGHIGFQ--VHGI----
-----KKGTG----------------PFSVR--WKNVKIR----------------

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