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Information about 6003860_25_205

Unaligned length: 181

Alignment length: 716

Description in the alignment: with redox domain, from Verrucomicrobium spinosum DSM 4136

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>6003860_25_205
VPIFDGKTFDGWEGETAKVWRIADGTIVGGSMEGNPQNEFLTTKKSYKNFTLQLEYKLVG
TEGFVNGGVQFRSKRIPNPPNEMSGFQADIGAGYTGCLYDESRRKKMMATADKNLITSTE
KPGEWNKYEIRAEGPRIRIFLNDKLTIDYVEREAGIDADGVIALQIHGNCKAVIAFRDIK
L

Aligned sequence

>6003860_25_205
------------------------------------------------------------
------------------------------------------------------------
---------------------------------V---PIF-D-GK--TF-DG-------W
E---GE----T---AKVW------------------------------------RIAD-G
---------------------------TIV--------------------GGSMEGNPQN
E-FLTT-----K-----K--SY-K-NFTLQLEYKL---------------VG-TEG----
----------------------FVNGGVQFRSK---------------------------
-RIPNP---PNEMSGF-QADIGA-----------------------------------GY
TGCLYDESRR------------------------------------KKMM----ATA---
-DKNL--ITSTEKPGEWNKYEI--RA-E-GPR---------------IR--I-FLN-DKL
TIDYVEREAGID------------------------------ADGVIALQ--IHGN----
-----CKA--------------------VIA--FRDIKL-----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory