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Information about 6248947_52_255

Unaligned length: 204

Alignment length: 716

Description in the alignment: single domain, from Chthoniobacter flavus Ellin428

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>6248947_52_255
GWRILFDGRNNYGLRGLTFNDWINRGWRIDRGSIFCVKEIKDMGLMTGGHLITLDQYLDF
EFHFEWKLSVSGKSGIMYFATGSAKEPKGFIYTIMDDVHNPDGLKGGPIRRTGALYNIIP
PSADKKLNGPDSWNEGSILVQGNHVEHWLNGGKVVEYDLGSPQFLQQVKASGVKQWQGFG
TKFKTALLIMDDGEEVEFRNLRIR

Aligned sequence

>6248947_52_255
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWRILF-D-GR--NN-YG-------L
R---GLTFNDW--INRGW------------------------------------RIDR-G
---------------------------SIFCV-----------------KEIKDMGLMTG
G-HLIT-----L-----D--QY-L-DFEFHFEWKL---------------SV-SG-----
------------------------KSGIMYFAT---------------------------
----GS---AKEPKGF-IYTIMD------DVHNPD----------------GLKGGPIRR
TGALYNI------------------------------------------IP---P-----
---SA--DKKLNGPDSWNEGSI--LV-Q-GNH---------------VE--H-WLN-GGK
VVEYDLGSPQFLQQVKASGVK-------------QWQGFGTKFKTALLIM--DDG-----
-------E--------------------EVE--FRNLRIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory