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Information about 6253153_22_242

Unaligned length: 221

Alignment length: 716

Description in the alignment: single domain, from Chthoniobacter flavus Ellin428

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>6253153_22_242
KNIFNGKDLTGWKGVDGFWSVQDGCITGATKTDHMIAENSFLVWQDGEVGDFELTCKFKL
VDQNGELKGFGNSGIQYRSKIVKPEYFVVAGYQADMDLGNTYTGMLYEEKGRGILCKPGE
KVTLSAAEKDPANPKAKDFKIEVTGTTATPAEIKGFIKAGDWNEYKIIAKGNHLQHFING
HQTADIIDNDAKHAAKTGVLALQLHKGPTGMTVQFKDMVLK

Aligned sequence

>6253153_22_242
------------------------------------------------------------
------------------------------------------------------------
------------------------------------KNIF-N-GK--DL-TG-------W
K---GVDGF--------W------------------------------------SVQD-G
---------------------------CITG------------------ATKTDHMIAEN
S-FLVW-----Q-----D-GEV-G-DFELTCKFKL---------------VD-QNGEL--
--------------------KGFGNSGIQYRSK---------------------------
-IVKPE---YFVVAGY-QADMDL---------------------------------GNTY
TGMLYEEKGRGILCKPGEKVTLSA-------AEKDPANPKAKDFKIEVTGTTATP-----
---AE--IKGFIKAGDWNEYKI--IA-K-GNH---------------LQ--H-FIN-GHQ
TADIIDNDAKHAA-----------------------------KTGVLALQ--LHKGP---
-----TGM--------------------TVQ--FKDMVLK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory