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Information about 6254732_35_232

Unaligned length: 198

Alignment length: 716

Description in the alignment: single domain, from Chthoniobacter flavus Ellin428

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>6254732_35_232
GWKLLFDGEDAAPWWRGYKKDGLPAGWKVENGALVRRGAGSGGDIITRDEFESFEFSIDW
KISPGGNSGVMFKVKETGQESWNTGPEVQILDNVLGRGSQKAGWLYELYPAVIDATKPAG
KWNNLIVRCQKTPAGTYECEHWLNGVKYVEYIIGSDDWHARVAKSKFADKPNFAKADAGH
ICLQDYGNEVAFRNIKIR

Aligned sequence

>6254732_35_232
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWKLLF-D-GE--DA-AP------WW
R---GYKKDGL---PAGW------------------------------------KVEN-G
---------------------------ALV-----------------------RRGAGSG
G-DIIT-----R-----D--EF-E-SFEFSIDWKI---------------SP-GG-----
------------------------NSGVMFKVK---------------------------
--ETGQ---ESWNTGP-EVQILD------NVLG----------------------RGSQK
AGWLY----------------------------------------------ELYP-----
---AV--IDATKPAGKWNNLIV--RC-Q-KTPAG----------TYECE--H-WLN-GVK
YVEYIIGSDDWHARVAKSKFA-------------DKPNFAKADAGHICLQ--DYG-----
-------N--------------------EVA--FRNIKIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory