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Information about 7058297_78_271

Unaligned length: 194

Alignment length: 716

Description in the alignment: single domain, from Gemmatimonas aurantiaca T-27

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>7058297_78_271
WVSLFNGQAISGWHNYKTPGAPVVGWSAINGELVRSGPGGDLTTDKQYTNFELELEWKVE
AGGNSGIIYRIDPASEVSYTSGPEMQILDDTKHPDGKNPLTSAGANYALHAPPAGIVKPV
GEWNAIRLIVNGNHVEHWLNGIKAVEYELGSPDWETRRQASKFATWTGYGRAARGYIALQ
DHGDRVAFRNLRIR

Aligned sequence

>7058297_78_271
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------WVSLF-N-GQ--AI-SG-------W
H---NYKTPGA--PVVGW------------------------------------SAIN-G
---------------------------ELV-------------------------RSGPG
G-DLTT-----D-----K--QY-T-NFELELEWKV---------------EA-GG-----
------------------------NSGIIYRID---------------------------
--PASE---VSYTSGP-EMQILD------DTKHP------------------DGKNPLTS
AGANY----------------------------------------------ALHA-----
---PP--AGIVKPVGEWNAIRL--IV-N-GNH---------------VE--H-WLN-GIK
AVEYELGSPDWETRRQASKFA-------------TWTGYGRAARGYIALQ--DHG-----
-------D--------------------RVA--FRNLRIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory