Sites on a Tree

 

Information about 7376920_669_882

Unaligned length: 214

Alignment length: 716

Description in the alignment: with redox domain, from Methylobacterium nodulans ORS 2060

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>7376920_669_882
IQLFDGQTITNWRMAGRGTFHVIDGALQSVPSFDLGLLWCTIPVPQNYRLELEFFTRTFQ
TNSGVFVRFRNPQSTGYYNPAYSAVFTPGLPAVAAGFEVQIDNTGAPDGRARHRTGAVYA
VNYPNDGPDDPALPAAQVADFVNPLDARVLAWNQYIIEVQGDVITVNLNGTATARYTNTD
PARGRFSPVEPTFIGLQSYANYSYTTAFRNIRIT

Aligned sequence

>7376920_669_882
------------------------------------------------------------
------------------------------------------------------------
------------------------------------IQLF-D-GQ--TI-TN-------W
R---MAGRGTF---H----------------------------------------VID-G
---------------------------ALQ-----------------------SVPSFDL
G-LLWC-----T-----I-PVP-Q-NYRLELEFFT---------------RTFQT-----
------------------------NSGVFVRFRNPQSTGY-------------YNPAYSA
VF---TPGLPAVAAGF-EVQIDN------TGAP--------------------DGRARHR
TGAVYAVNYPNDG------------------------------PDDPALPAAQVA-----
--DFV--NPLDARVLAWNQYII--EV-Q-GDV---------------IT--V-NLN-GTA
TARYTNTDPARGRFS-------------------------PVEPTFIGLQ--SYA-----
-------NY-----------------SYTTA--FRNIRI-T---------------

Back to tree

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory