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Information about 7399615_36_237

Unaligned length: 202

Alignment length: 716

Description in the alignment: single domain, from Dyadobacter fermentans DSM 18053

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>7399615_36_237
GWSLLFDGKTTNGWHLYNKGKMPSAWIVQKGELYCDPTLTSAMHGDLVTDKEYENYDLRF
EWKISKAGNSGVFVNVKESKDIPTAWASGPEYQLLEKTHYDYNSNPKKRAGCLYSFQSQK
NAATDKPVGQWNQSRIVQKNGKIQFFLNGTLTAEEDFKSEKWKKMVADSHFKTFPEFGKY
TKGHLTLQDWAKGISFRNIKIK

Aligned sequence

>7399615_36_237
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GWSLLF-D-GK--TT-NG-------W
H---LYNKGKM---PSAW------------------------------------IVQK-G
---------------------------ELY--------------------CDPTLTSAMH
G-DLVT-----D-----K--EY-E-NYDLRFEWKI---------------SK-AG-----
------------------------NSGVFVNVK---------------------------
ESKDIP---TAWASGP-EYQLLE------KTHYD------------------YNSNPKKR
AGCLY---------------------------------------------SFQSQ-----
---KN--AATDKPVGQWNQSRI--VQ-K-NGK---------------IQ--F-FLN-GTL
TAEEDFKSEKWKKMVADSHFK-------------TFPEFGKYTKGHLTLQ--DWA-----
-------K--------------------GIS--FRNIKIK----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory