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Information about 7460989_37_237

Unaligned length: 201

Alignment length: 716

Description in the alignment: single domain, from Pedobacter heparinus DSM 2366

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>7460989_37_237
WISLFDGQSLKGWHIFNKTGQIENWTVEDGAMVCHGFKGPSGAGDIVSDLKFENFELSWE
WKVDKGSNSGVFYHILEGPKYHRASETAPEYQIIDDAGFPAKLEEWQKTGADYAMNVPND
KKKLQPTGTWNTSKIIFNKGHVEHWLNGKKIVEFNAWTEEWNRQKKEGKWKDYPDYGIAK
AGSVGFQDHGNKAYFKNIKIR

Aligned sequence

>7460989_37_237
------------------------------------------------------------
------------------------------------------------------------
-----------------------------------WISLF-D-GQ--SL-KG-------W
H---IFNKTGQ---IENW------------------------------------TVED-G
---------------------------AMV--------------------CHGFKGPSGA
G-DIVS-----D-----L--KF-E-NFELSWEWKV---------------DK-GS-----
------------------------NSGVFYHIL---------------------------
EGPKYH---RASETAP-EYQIID------DAGFP------------------AKLEEWQK
TGADY---------------------------------------------AMNVP-----
---ND--KKKLQPTGTWNTSKI--IF-N-KGH---------------VE--H-WLN-GKK
IVEFNAWTEEWNRQKKEGKWK-------------DYPDYGIAKAGSVGFQ--DHG-----
-------N--------------------KAY--FKNIKIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory