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Information about 7462545_728_927

Unaligned length: 200

Alignment length: 716

Description in the alignment: with other domain, near sugar dehydrogenase, from Pedobacter heparinus DSM 2366

Link (from the uploaded table)

No known functional residues in BioLiP or SwissProt.

Sequence analysis tools

Find papers: PaperBLAST

Find functional residues: SitesBLAST

Search for conserved domains

Find the best match in UniProt

Compare to protein structures

Predict transmenbrane helices: Phobius

Predict protein localization: PSORTb

Find homologs in fast.genomics

Fitness BLAST: loading...

Sequence

>7462545_728_927
GFVSMFNGTDLSGWKGLVENPIKRSKMDAKSLADAQVKADAEAKESWKPMNGELHFMSHG
NNLATVKQYGDFEMLVDWKIIDDKKGNGDAGIYLRGSPQVQIWDTARVKSGAQVGSGGLY
NNKVYESKPLKVADNKLDEWNTFRILMKGDRVTVYLNGELVTDNVILENYWDRNLPIFAE
EQIELQAHGSPVAYRDIYIR

Aligned sequence

>7462545_728_927
------------------------------------------------------------
------------------------------------------------------------
----------------------------------GFVSMF-N-GT--DL-SG-------W
K---GLVENPI---KRSKMDAKSLADAQ---------------VKADAEAKESWKPMN-G
---------------------------ELH-------------------------FMSHG
N-NLAT-----V-----K--QY-G-DFEMLVDWKIID-----------DKK---GN----
-----------------------GDAGIYLRGS---------------------------
---------------P-QVQIWD------TARV--------------------KSGAQVG
SGGLYNN------------------------------------------KVYESK-----
---PL--KVADNKLDEWNTFRI--LM-K-GDR---------------VT--V-YLN-GEL
VTDNVILENYWDRNLP------------------------IFAEEQIELQ--AHG-----
-------S--------------------PVA--YRDIYIR----------------

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory