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Comment: DUF1080 is a family of hydrolases and includes putative 3-ketoglycoside hydrolases. The putative active site was identified from the structure of BT2157 (PDB:3osd). In the tree, BT2157 and other 3-ketoglycoside hydrolases are colored green, and endoglucanase THTE_1561 is in red. These members of DUF1080 were taken from MicrobesOnline (using hits to PFam PF06439.11 with 80 bits or higher), clustered at 60% identity to reduce the number of sequences, and aligned using hmmalign.

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Highlight proteins:

0.451 0.427 0.957 5635396_34_225: single domain, from Phenylobacterium zucineum HLK1 5650395_26_219: single domain, from Opitutus terrae PB90-1 0.840 4592619_38_216: single domain, from Planctomyces maris DSM 8797 0.945 2221277_10_210: single domain, from Solibacter usitatus Ellin6076 2224300_9_241: single domain, from Solibacter usitatus Ellin6076 0.854 0.989 6254732_35_232: single domain, from Chthoniobacter flavus Ellin428 0.945 557204_55_252: single domain, from Pirellula sp. 1 4590561_54_263: with other domain, from Planctomyces maris DSM 8797 0.987 2107363_45_249: single domain, near sugar dehydrogenase, from Gramella forsetii KT0803 2766526_24_229: single domain, from Flavobacteriales bacterium HTCC2170 1 /site single domain, from Phenylobacterium zucineum HLK1 5635396_34_225 single domain, from Phenylobacterium zucineum HLK1 single domain, from Opitutus terrae PB90-1 5650395_26_219 single domain, from Opitutus terrae PB90-1 single domain, from Planctomyces maris DSM 8797 4592619_38_216 single domain, from Planctomyces maris DSM 8797 single domain, from Solibacter usitatus Ellin6076 2221277_10_210 single domain, from Solibacter usitatus Ellin6076 single domain, from Solibacter usitatus Ellin6076 2224300_9_241 single domain, from Solibacter usitatus Ellin6076 single domain, from Chthoniobacter flavus Ellin428 6254732_35_232 single domain, from Chthoniobacter flavus Ellin428 single domain, from Pirellula sp. 1 557204_55_252 single domain, from Pirellula sp. 1 with other domain, from Planctomyces maris DSM 8797 4590561_54_263 with other domain, from Planctomyces maris DSM 8797 single domain, near sugar dehydrogenase, from Gramella forsetii KT0803 2107363_45_249 single domain, near sugar dehydrogenase, from Gramella forsetii KT0803 single domain, from Flavobacteriales bacterium HTCC2170 2766526_24_229 single domain, from Flavobacteriales bacterium HTCC2170 download SVG

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory