Unaligned length: 216
Alignment length: 716
Description in the alignment: single domain, from Isosphaera pallida IS1B, ATCC 43644
Link (from the uploaded table)
No known functional residues in BioLiP or SwissProt.
Find papers: PaperBLAST
Find functional residues: SitesBLAST
Search for conserved domains
Find the best match in UniProt
Compare to protein structures
Predict transmenbrane helices: Phobius
Predict protein localization: PSORTb
Find homologs in fast.genomics
Fitness BLAST: loading...
>11269095_78_293 SDLSAWKPPTGTWFTAADAGLNPDNRRLLVGLESPASPGQSNAKPVLINGPIGRTHNLVS RRNFQDVEVDLEFMVSERSNSGVKLMGLYEIQIYDSFEKPDDQLKGFDNGGIYPRALMTP RYHHIDEGYRPKVNASRAPGQWQTLTIRFRAPRFDAKGTKTKCAVFERVTLNGVVVQENV QMELPTGHAHVARKEVAEGPILLQADHGPVAFRNIR
>11269095_78_293 ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------S-------------DL-SA-------W K---PPTGTWF---TAADAGLNP-------------------------DNRRLLV----G LESPASP-------------GQSNAKPVLI-----------------------NGPIGRT H-NLVS-----R-----R--NF-Q-DVEVDLEFMV---------------SE-RS----- ------------------------NSGVKLMGL--------------------------- ---------------Y-EIQIYD------SFEKP------------------DDQLKGFD NGGIYPRALMT---------------------------------PRYHHIDEGYR----- ---PK--VNASRAPGQWQTLTI--RF-R-APRFDAKGT--KTKCAVFER--V-TLN-GVV VQENVQMELPTGHAHVA---------------------RKEVAEGPILLQ-ADHG----- ----------------------------PVA--FRNIR------------------
Lawrence Berkeley National Laboratory