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Comment: DUF1080 is a family of hydrolases and includes putative 3-ketoglycoside hydrolases. The putative active site was identified from the structure of BT2157 (PDB:3osd). In the tree, BT2157 and other 3-ketoglycoside hydrolases are colored green, and endoglucanase THTE_1561 is in red. These members of DUF1080 were taken from MicrobesOnline (using hits to PFam PF06439.11 with 80 bits or higher), clustered at 60% identity to reduce the number of sequences, and aligned using hmmalign.

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Highlight proteins:

0.355 11295415_26_253: single domain, from Planctomyces brasiliensis DSM 5305 0.789 7399905_41_280: single domain, from Dyadobacter fermentans DSM 18053 0.049 2712523_30_259: single domain, from Tenacibaculum sp. MED152 2766517_33_261: single domain, from Flavobacteriales bacterium HTCC2170 0.2 /site single domain, from Planctomyces brasiliensis DSM 5305 11295415_26_253 single domain, from Planctomyces brasiliensis DSM 5305 single domain, from Dyadobacter fermentans DSM 18053 7399905_41_280 single domain, from Dyadobacter fermentans DSM 18053 single domain, from Tenacibaculum sp. MED152 2712523_30_259 single domain, from Tenacibaculum sp. MED152 single domain, from Flavobacteriales bacterium HTCC2170 2766517_33_261 single domain, from Flavobacteriales bacterium HTCC2170 download SVG

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory