Unaligned length: 222
Alignment length: 716
Description in the alignment: single domain, from Runella slithyformis LSU4, DSM 19594
Link (from the uploaded table)
No known functional residues in BioLiP or SwissProt.
Find papers: PaperBLAST
Find functional residues: SitesBLAST
Search for conserved domains
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Compare to protein structures
Predict transmenbrane helices: Phobius
Predict protein localization: PSORTb
Find homologs in fast.genomics
Fitness BLAST: loading...
>11141775_41_262 GFVQIFDGKTLNGWDGDPTYWRAENGNLVGEITPTTLLKTNSFIIWKGGEPADFELKGEF NITKAGNSGINYRSDRLTDIPFALRGYQADIDGNNRYTGQNYEERKRTTLAYRGQKTVIN PQTGTFTPEAVRAKVKSNAWTDLKVTGSLGSSDSLKTLIKSEDWNEFHLIVKGNRLQHYI NGVLMSEVTDNDAVNGKSKGLLGVQVHVGPPMKVQYRNLRLK
>11141775_41_262 ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------GFVQIF-D-GK--TL-NG-------W D---GDPTYWR---A-----------------------------------------EN-G ---------------------------NLVG------------------EITPTTLLKTN S-FIIW-----K-----G-GEP-A-DFELKGEFNI---------------TK-AG----- ------------------------NSGINYRSD--------------------------- -RLTDI---PFALRGY-QADIDG---------------------------------NNRY TGQNYEERKRTTLAYRGQKTVINPQTGTFTPEAVRAKVKSNAWTDLKVTGSLGSS----- ---DS--LKTLIKSEDWNEFHL--IV-K-GNR---------------LQ--H-YIN-GVL MSEVTDNDAVNGK-----------------------------SKGLLGVQ--VHVG---- -----PPM--------------------KVQ--YRNLRLK----------------
Lawrence Berkeley National Laboratory