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Comment: DUF1080 is a family of hydrolases and includes putative 3-ketoglycoside hydrolases. The putative active site was identified from the structure of BT2157 (PDB:3osd). In the tree, BT2157 and other 3-ketoglycoside hydrolases are colored green, and endoglucanase THTE_1561 is in red. These members of DUF1080 were taken from MicrobesOnline (using hits to PFam PF06439.11 with 80 bits or higher), clustered at 60% identity to reduce the number of sequences, and aligned using hmmalign.

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Highlight proteins:

0.700 0.973 4594548_352_539: with other domain, near sugar dehydrogenase, from Planctomyces maris DSM 8797 0.793 4614230_39_205: single domain, from Lentisphaera araneosa HTCC2155 6253107_21_166: single domain, from Chthoniobacter flavus Ellin428 0.899 11294916_26_207: single domain, from Planctomyces brasiliensis DSM 5305 2224519_22_203: single domain, from Solibacter usitatus Ellin6076 1 /site with other domain, near sugar dehydrogenase, from Planctomyces maris DSM 8797 4594548_352_539 with other domain, near sugar dehydrogenase, from Planctomyces maris DSM 8797 single domain, from Lentisphaera araneosa HTCC2155 4614230_39_205 single domain, from Lentisphaera araneosa HTCC2155 single domain, from Chthoniobacter flavus Ellin428 6253107_21_166 single domain, from Chthoniobacter flavus Ellin428 single domain, from Planctomyces brasiliensis DSM 5305 11294916_26_207 single domain, from Planctomyces brasiliensis DSM 5305 single domain, from Solibacter usitatus Ellin6076 2224519_22_203 single domain, from Solibacter usitatus Ellin6076 download SVG

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory