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Comment: DUF1080 is a family of hydrolases and includes putative 3-ketoglycoside hydrolases. The putative active site was identified from the structure of BT2157 (PDB:3osd). In the tree, BT2157 and other 3-ketoglycoside hydrolases are colored green, and endoglucanase THTE_1561 is in red. These members of DUF1080 were taken from MicrobesOnline (using hits to PFam PF06439.11 with 80 bits or higher), clustered at 60% identity to reduce the number of sequences, and aligned using hmmalign.

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0.834 0.186 0.918 0.629 0.998 558057_260_435: tandem domain, from Pirellula sp. 1 10307912_359_538: tandem domain, from Pirellula staleyi DSM 6068 0.910 0.034 0.771 0.911 10262249_29_210: single domain, from Spirosoma linguale DSM 74 0.455 0.672 4591527_43_215: single domain, from Planctomyces maris DSM 8797 0.993 2223153_25_190: single domain, from Solibacter usitatus Ellin6076 0.910 4908135_36_246: single domain, from Gemmata obscuriglobus UQM 2246 0.878 554351_85_257: single domain, from Pirellula sp. 1 11269824_44_215: single domain, from Isosphaera pallida IS1B, ATCC 43644 0.974 6253341_25_206: single domain, from Chthoniobacter flavus Ellin428 0.905 2764129_27_207: single domain, from Blastopirellula marina DSM 3645 6004371_23_210: single domain, from Verrucomicrobium spinosum DSM 4136 0.613 2221107_28_212: with other domain, from Solibacter usitatus Ellin6076 5646913_28_225: with other domain, from Opitutus terrae PB90-1 0.594 11272068_67_249: single domain, from Isosphaera pallida IS1B, ATCC 43644 0.974 3722502_28_193: with other domain, from Parabacteroides distasonis ATCC 8503 4262859_41_193: with other domain, from Bacteroides uniformis ATCC 8492 11292681_28_217: single domain, from Planctomyces brasiliensis DSM 5305 0.998 2221152_22_224: single domain, from Solibacter usitatus Ellin6076 2222289_283_466: with redox domain, from Solibacter usitatus Ellin6076 0.834 0.927 0.970 11294790_78_245: tandem domain, from Planctomyces brasiliensis DSM 5305 0.823 558057_88_251: tandem domain, from Pirellula sp. 1 0.829 10357232_410_572: with other domain, from Coraliomargarita akajimensis DSM 45221 0.324 4595334_71_236: tandem domain, from Planctomyces maris DSM 8797 0.125 2760313_39_201: tandem domain, from Blastopirellula marina DSM 3645 10307912_189_353: tandem domain, from Pirellula staleyi DSM 6068 0.968 2767479_46_191: single domain, from Flavobacteriales bacterium HTCC2170 0.813 6890070_31_195: single domain, from Polynucleobacter sp. QLW-P1DMWA-1 10343720_38_183: single domain, from Allochromatium vinosum DSM 180 0.607 3723284_29_221: single domain, from Parabacteroides distasonis ATCC 8503 4911270_310_467: with other domain, from Gemmata obscuriglobus UQM 2246 0.883 0.695 0.700 0.932 0.920 6004792_562_779: with other domain, from Verrucomicrobium spinosum DSM 4136 0.893 7352115_10_283: single domain, near sugar dehydrogenase, from Arthrobacter chlorophenolicus A6 10307627_52_286: single domain, from Pirellula staleyi DSM 6068 11129631_48_250: single domain, from Aquiflexum balticum BA160, DSM 16537 0.884 4613166_24_177: single domain, from Lentisphaera araneosa HTCC2155 0.834 6251748_28_203: single domain, from Chthoniobacter flavus Ellin428 11136081_27_193: single domain, from Haliscomenobacter hydrossis O, DSM 1100 10307487_41_200: tandem domain, from Pirellula staleyi DSM 6068 0.858 0.901 0.827 2224729_30_207: single domain, from Solibacter usitatus Ellin6076 7471529_22_194: single domain, from Chitinophaga pinensis DSM 2588 0.992 0.855 11293622_25_202: single domain, from Planctomyces brasiliensis DSM 5305 0.607 0.532 11269564_221_397: tandem domain, from Isosphaera pallida IS1B, ATCC 43644 559162_234_438: tandem domain, from Pirellula sp. 1 556011_250_415: tandem domain, from Pirellula sp. 1 THTE_1561: endoxanthanase from Thermogutta terrifontis 0.816 10356452_324_537: with other domain, from Coraliomargarita akajimensis DSM 45221 0.866 0.860 0.666 0.798 10356339_57_245: single domain, from Coraliomargarita akajimensis DSM 45221 0.831 554685_116_314: with other domain, from Pirellula sp. 1 0.913 0.871 2220515_8_228: single domain, from Solibacter usitatus Ellin6076 11141775_41_262: single domain, from Runella slithyformis LSU4, DSM 19594 0.742 0.774 0.577 2760957_28_228: with redox domain, from Blastopirellula marina DSM 3645 0.920 0.941 0.518 556853_51_260: single domain, from Pirellula sp. 1 6004807_27_244: single domain, from Verrucomicrobium spinosum DSM 4136 6254877_31_231: single domain, from Chthoniobacter flavus Ellin428 6253153_22_242: single domain, from Chthoniobacter flavus Ellin428 559512_79_278: single domain, from Pirellula sp. 1 0.936 11293204_36_238: with redox domain, from Planctomyces brasiliensis DSM 5305 0.887 0.870 554416_28_225: with redox domain, from Pirellula sp. 1 4611874_988_1186: with redox domain, from Lentisphaera araneosa HTCC2155 11296383_24_224: with redox domain, from Planctomyces brasiliensis DSM 5305 0.880 0.809 0.707 11227501_33_203: single domain, from Cyclobacterium marinum DSM 745 2761067_1173_1341: with redox domain, from Blastopirellula marina DSM 3645 0.866 4911453_35_208: single domain, from Gemmata obscuriglobus UQM 2246 11272043_27_202: single domain, from Isosphaera pallida IS1B, ATCC 43644 0.811 0.719 0.489 6378172_468_664: with other domain, from Bacteroides cellulosilyticus DSM 14838 0.861 6003860_25_205: with redox domain, from Verrucomicrobium spinosum DSM 4136 7396463_28_209: single domain, from Dyadobacter fermentans DSM 18053 0.910 2761156_23_206: single domain, from Blastopirellula marina DSM 3645 560752_63_281: single domain, from Pirellula sp. 1 0.551 11268538_332_511: with other domain, from Isosphaera pallida IS1B, ATCC 43644 0.513 6250794_21_205: with redox domain, from Chthoniobacter flavus Ellin428 10267460_32_215: single domain, from Spirosoma linguale DSM 74 0.835 2221983_152_318: single domain, from Solibacter usitatus Ellin6076 4909784_48_228: single domain, from Gemmata obscuriglobus UQM 2246 0.741 0.657 0.986 0.462 0.701 6001914_31_230: single domain, from Verrucomicrobium spinosum DSM 4136 4616165_23_217: single domain, from Lentisphaera araneosa HTCC2155 0.896 554998_519_700: with redox domain, from Pirellula sp. 1 4612229_39_228: single domain, from Lentisphaera araneosa HTCC2155 0.412 10304809_24_215: single domain, from Pirellula staleyi DSM 6068 10359243_331_522: with redox domain, from Coraliomargarita akajimensis DSM 45221 0.000 11127954_46_240: single domain, from Aquiflexum balticum BA160, DSM 16537 0.000 352996_22_206: tandem domain, near sugar dehydrogenase, from Bacteroides thetaiotaomicron VPI-5482 11202178_22_203: tandem domain, near sugar dehydrogenase, from Cytophaga fermentans IAM 14302, DSM 9555 0.000 0.068 556011_29_219: tandem domain, from Pirellula sp. 1 10359233_59_249: tandem domain, from Coraliomargarita akajimensis DSM 45221 0.952 4615012_42_228: single domain, near sugar dehydrogenase, from Lentisphaera araneosa HTCC2155 0.941 554419_49_246: with other domain, from Pirellula sp. 1 559162_54_228: tandem domain, from Pirellula sp. 1 1 /site tandem domain, from Pirellula sp. 1 558057_260_435 tandem domain, from Pirellula sp. 1 tandem domain, from Pirellula staleyi DSM 6068 10307912_359_538 tandem domain, from Pirellula staleyi DSM 6068 single domain, from Spirosoma linguale DSM 74 10262249_29_210 single domain, from Spirosoma linguale DSM 74 single domain, from Planctomyces maris DSM 8797 4591527_43_215 single domain, from Planctomyces maris DSM 8797 single domain, from Solibacter usitatus Ellin6076 2223153_25_190 single domain, from Solibacter usitatus Ellin6076 single domain, from Gemmata obscuriglobus UQM 2246 4908135_36_246 single domain, from Gemmata obscuriglobus UQM 2246 single domain, from Pirellula sp. 1 554351_85_257 single domain, from Pirellula sp. 1 single domain, from Isosphaera pallida IS1B, ATCC 43644 11269824_44_215 single domain, from Isosphaera pallida IS1B, ATCC 43644 single domain, from Chthoniobacter flavus Ellin428 6253341_25_206 single domain, from Chthoniobacter flavus Ellin428 single domain, from Blastopirellula marina DSM 3645 2764129_27_207 single domain, from Blastopirellula marina DSM 3645 single domain, from Verrucomicrobium spinosum DSM 4136 6004371_23_210 single domain, from Verrucomicrobium spinosum DSM 4136 with other domain, from Solibacter usitatus Ellin6076 2221107_28_212 with other domain, from Solibacter usitatus Ellin6076 with other domain, from Opitutus terrae PB90-1 5646913_28_225 with other domain, from Opitutus terrae PB90-1 single domain, from Isosphaera pallida IS1B, ATCC 43644 11272068_67_249 single domain, from Isosphaera pallida IS1B, ATCC 43644 with other domain, from Parabacteroides distasonis ATCC 8503 3722502_28_193 with other domain, from Parabacteroides distasonis ATCC 8503 with other domain, from Bacteroides uniformis ATCC 8492 4262859_41_193 with other domain, from Bacteroides uniformis ATCC 8492 single domain, from Planctomyces brasiliensis DSM 5305 11292681_28_217 single domain, from Planctomyces brasiliensis DSM 5305 single domain, from Solibacter usitatus Ellin6076 2221152_22_224 single domain, from Solibacter usitatus Ellin6076 with redox domain, from Solibacter usitatus Ellin6076 2222289_283_466 with redox domain, from Solibacter usitatus Ellin6076 tandem domain, from Planctomyces brasiliensis DSM 5305 11294790_78_245 tandem domain, from Planctomyces brasiliensis DSM 5305 tandem domain, from Pirellula sp. 1 558057_88_251 tandem domain, from Pirellula sp. 1 with other domain, from Coraliomargarita akajimensis DSM 45221 10357232_410_572 with other domain, from Coraliomargarita akajimensis DSM 45221 tandem domain, from Planctomyces maris DSM 8797 4595334_71_236 tandem domain, from Planctomyces maris DSM 8797 tandem domain, from Blastopirellula marina DSM 3645 2760313_39_201 tandem domain, from Blastopirellula marina DSM 3645 tandem domain, from Pirellula staleyi DSM 6068 10307912_189_353 tandem domain, from Pirellula staleyi DSM 6068 single domain, from Flavobacteriales bacterium HTCC2170 2767479_46_191 single domain, from Flavobacteriales bacterium HTCC2170 single domain, from Polynucleobacter sp. QLW-P1DMWA-1 6890070_31_195 single domain, from Polynucleobacter sp. QLW-P1DMWA-1 single domain, from Allochromatium vinosum DSM 180 10343720_38_183 single domain, from Allochromatium vinosum DSM 180 single domain, from Parabacteroides distasonis ATCC 8503 3723284_29_221 single domain, from Parabacteroides distasonis ATCC 8503 with other domain, from Gemmata obscuriglobus UQM 2246 4911270_310_467 with other domain, from Gemmata obscuriglobus UQM 2246 with other domain, from Verrucomicrobium spinosum DSM 4136 6004792_562_779 with other domain, from Verrucomicrobium spinosum DSM 4136 single domain, near sugar dehydrogenase, from Arthrobacter chlorophenolicus A6 7352115_10_283 single domain, near sugar dehydrogenase, from Arthrobacter chlorophenolicus A6 single domain, from Pirellula staleyi DSM 6068 10307627_52_286 single domain, from Pirellula staleyi DSM 6068 single domain, from Aquiflexum balticum BA160, DSM 16537 11129631_48_250 single domain, from Aquiflexum balticum BA160, DSM 16537 single domain, from Lentisphaera araneosa HTCC2155 4613166_24_177 single domain, from Lentisphaera araneosa HTCC2155 single domain, from Chthoniobacter flavus Ellin428 6251748_28_203 single domain, from Chthoniobacter flavus Ellin428 single domain, from Haliscomenobacter hydrossis O, DSM 1100 11136081_27_193 single domain, from Haliscomenobacter hydrossis O, DSM 1100 tandem domain, from Pirellula staleyi DSM 6068 10307487_41_200 tandem domain, from Pirellula staleyi DSM 6068 single domain, from Solibacter usitatus Ellin6076 2224729_30_207 single domain, from Solibacter usitatus Ellin6076 single domain, from Chitinophaga pinensis DSM 2588 7471529_22_194 single domain, from Chitinophaga pinensis DSM 2588 single domain, from Planctomyces brasiliensis DSM 5305 11293622_25_202 single domain, from Planctomyces brasiliensis DSM 5305 tandem domain, from Isosphaera pallida IS1B, ATCC 43644 11269564_221_397 tandem domain, from Isosphaera pallida IS1B, ATCC 43644 tandem domain, from Pirellula sp. 1 559162_234_438 tandem domain, from Pirellula sp. 1 tandem domain, from Pirellula sp. 1 556011_250_415 tandem domain, from Pirellula sp. 1 endoxanthanase from Thermogutta terrifontis THTE_1561 endoxanthanase from Thermogutta terrifontis with other domain, from Coraliomargarita akajimensis DSM 45221 10356452_324_537 with other domain, from Coraliomargarita akajimensis DSM 45221 single domain, from Coraliomargarita akajimensis DSM 45221 10356339_57_245 single domain, from Coraliomargarita akajimensis DSM 45221 with other domain, from Pirellula sp. 1 554685_116_314 with other domain, from Pirellula sp. 1 single domain, from Solibacter usitatus Ellin6076 2220515_8_228 single domain, from Solibacter usitatus Ellin6076 single domain, from Runella slithyformis LSU4, DSM 19594 11141775_41_262 single domain, from Runella slithyformis LSU4, DSM 19594 with redox domain, from Blastopirellula marina DSM 3645 2760957_28_228 with redox domain, from Blastopirellula marina DSM 3645 single domain, from Pirellula sp. 1 556853_51_260 single domain, from Pirellula sp. 1 single domain, from Verrucomicrobium spinosum DSM 4136 6004807_27_244 single domain, from Verrucomicrobium spinosum DSM 4136 single domain, from Chthoniobacter flavus Ellin428 6254877_31_231 single domain, from Chthoniobacter flavus Ellin428 single domain, from Chthoniobacter flavus Ellin428 6253153_22_242 single domain, from Chthoniobacter flavus Ellin428 single domain, from Pirellula sp. 1 559512_79_278 single domain, from Pirellula sp. 1 with redox domain, from Planctomyces brasiliensis DSM 5305 11293204_36_238 with redox domain, from Planctomyces brasiliensis DSM 5305 with redox domain, from Pirellula sp. 1 554416_28_225 with redox domain, from Pirellula sp. 1 with redox domain, from Lentisphaera araneosa HTCC2155 4611874_988_1186 with redox domain, from Lentisphaera araneosa HTCC2155 with redox domain, from Planctomyces brasiliensis DSM 5305 11296383_24_224 with redox domain, from Planctomyces brasiliensis DSM 5305 single domain, from Cyclobacterium marinum DSM 745 11227501_33_203 single domain, from Cyclobacterium marinum DSM 745 with redox domain, from Blastopirellula marina DSM 3645 2761067_1173_1341 with redox domain, from Blastopirellula marina DSM 3645 single domain, from Gemmata obscuriglobus UQM 2246 4911453_35_208 single domain, from Gemmata obscuriglobus UQM 2246 single domain, from Isosphaera pallida IS1B, ATCC 43644 11272043_27_202 single domain, from Isosphaera pallida IS1B, ATCC 43644 with other domain, from Bacteroides cellulosilyticus DSM 14838 6378172_468_664 with other domain, from Bacteroides cellulosilyticus DSM 14838 with redox domain, from Verrucomicrobium spinosum DSM 4136 6003860_25_205 with redox domain, from Verrucomicrobium spinosum DSM 4136 single domain, from Dyadobacter fermentans DSM 18053 7396463_28_209 single domain, from Dyadobacter fermentans DSM 18053 single domain, from Blastopirellula marina DSM 3645 2761156_23_206 single domain, from Blastopirellula marina DSM 3645 single domain, from Pirellula sp. 1 560752_63_281 single domain, from Pirellula sp. 1 with other domain, from Isosphaera pallida IS1B, ATCC 43644 11268538_332_511 with other domain, from Isosphaera pallida IS1B, ATCC 43644 with redox domain, from Chthoniobacter flavus Ellin428 6250794_21_205 with redox domain, from Chthoniobacter flavus Ellin428 single domain, from Spirosoma linguale DSM 74 10267460_32_215 single domain, from Spirosoma linguale DSM 74 single domain, from Solibacter usitatus Ellin6076 2221983_152_318 single domain, from Solibacter usitatus Ellin6076 single domain, from Gemmata obscuriglobus UQM 2246 4909784_48_228 single domain, from Gemmata obscuriglobus UQM 2246 single domain, from Verrucomicrobium spinosum DSM 4136 6001914_31_230 single domain, from Verrucomicrobium spinosum DSM 4136 single domain, from Lentisphaera araneosa HTCC2155 4616165_23_217 single domain, from Lentisphaera araneosa HTCC2155 with redox domain, from Pirellula sp. 1 554998_519_700 with redox domain, from Pirellula sp. 1 single domain, from Lentisphaera araneosa HTCC2155 4612229_39_228 single domain, from Lentisphaera araneosa HTCC2155 single domain, from Pirellula staleyi DSM 6068 10304809_24_215 single domain, from Pirellula staleyi DSM 6068 with redox domain, from Coraliomargarita akajimensis DSM 45221 10359243_331_522 with redox domain, from Coraliomargarita akajimensis DSM 45221 single domain, from Aquiflexum balticum BA160, DSM 16537 11127954_46_240 single domain, from Aquiflexum balticum BA160, DSM 16537 tandem domain, near sugar dehydrogenase, from Bacteroides thetaiotaomicron VPI-5482 352996_22_206 tandem domain, near sugar dehydrogenase, from Bacteroides thetaiotaomicron VPI-5482 tandem domain, near sugar dehydrogenase, from Cytophaga fermentans IAM 14302, DSM 9555 11202178_22_203 tandem domain, near sugar dehydrogenase, from Cytophaga fermentans IAM 14302, DSM 9555 tandem domain, from Pirellula sp. 1 556011_29_219 tandem domain, from Pirellula sp. 1 tandem domain, from Coraliomargarita akajimensis DSM 45221 10359233_59_249 tandem domain, from Coraliomargarita akajimensis DSM 45221 single domain, near sugar dehydrogenase, from Lentisphaera araneosa HTCC2155 4615012_42_228 single domain, near sugar dehydrogenase, from Lentisphaera araneosa HTCC2155 with other domain, from Pirellula sp. 1 554419_49_246 with other domain, from Pirellula sp. 1 tandem domain, from Pirellula sp. 1 559162_54_228 tandem domain, from Pirellula sp. 1 download SVG

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory