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Comment: DUF1080 is a family of hydrolases and includes putative 3-ketoglycoside hydrolases. The putative active site was identified from the structure of BT2157 (PDB:3osd). In the tree, BT2157 and other 3-ketoglycoside hydrolases are colored green, and endoglucanase THTE_1561 is in red. These members of DUF1080 were taken from MicrobesOnline (using hits to PFam PF06439.11 with 80 bits or higher), clustered at 60% identity to reduce the number of sequences, and aligned using hmmalign.

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0.866 0.860 0.666 0.798 10356339_57_245: single domain, from Coraliomargarita akajimensis DSM 45221 0.831 554685_116_314: with other domain, from Pirellula sp. 1 0.913 0.871 2220515_8_228: single domain, from Solibacter usitatus Ellin6076 11141775_41_262: single domain, from Runella slithyformis LSU4, DSM 19594 0.742 0.774 0.577 2760957_28_228: with redox domain, from Blastopirellula marina DSM 3645 0.920 0.941 0.518 556853_51_260: single domain, from Pirellula sp. 1 6004807_27_244: single domain, from Verrucomicrobium spinosum DSM 4136 6254877_31_231: single domain, from Chthoniobacter flavus Ellin428 6253153_22_242: single domain, from Chthoniobacter flavus Ellin428 559512_79_278: single domain, from Pirellula sp. 1 0.936 11293204_36_238: with redox domain, from Planctomyces brasiliensis DSM 5305 0.887 0.870 554416_28_225: with redox domain, from Pirellula sp. 1 4611874_988_1186: with redox domain, from Lentisphaera araneosa HTCC2155 11296383_24_224: with redox domain, from Planctomyces brasiliensis DSM 5305 0.880 0.809 0.707 11227501_33_203: single domain, from Cyclobacterium marinum DSM 745 2761067_1173_1341: with redox domain, from Blastopirellula marina DSM 3645 0.866 4911453_35_208: single domain, from Gemmata obscuriglobus UQM 2246 11272043_27_202: single domain, from Isosphaera pallida IS1B, ATCC 43644 0.811 0.719 0.489 6378172_468_664: with other domain, from Bacteroides cellulosilyticus DSM 14838 0.861 6003860_25_205: with redox domain, from Verrucomicrobium spinosum DSM 4136 7396463_28_209: single domain, from Dyadobacter fermentans DSM 18053 0.910 2761156_23_206: single domain, from Blastopirellula marina DSM 3645 560752_63_281: single domain, from Pirellula sp. 1 0.551 11268538_332_511: with other domain, from Isosphaera pallida IS1B, ATCC 43644 0.513 6250794_21_205: with redox domain, from Chthoniobacter flavus Ellin428 10267460_32_215: single domain, from Spirosoma linguale DSM 74 0.835 2221983_152_318: single domain, from Solibacter usitatus Ellin6076 4909784_48_228: single domain, from Gemmata obscuriglobus UQM 2246 0.741 0.657 0.986 0.462 0.701 6001914_31_230: single domain, from Verrucomicrobium spinosum DSM 4136 4616165_23_217: single domain, from Lentisphaera araneosa HTCC2155 0.896 554998_519_700: with redox domain, from Pirellula sp. 1 4612229_39_228: single domain, from Lentisphaera araneosa HTCC2155 0.412 10304809_24_215: single domain, from Pirellula staleyi DSM 6068 10359243_331_522: with redox domain, from Coraliomargarita akajimensis DSM 45221 0.000 11127954_46_240: single domain, from Aquiflexum balticum BA160, DSM 16537 0.000 352996_22_206: tandem domain, near sugar dehydrogenase, from Bacteroides thetaiotaomicron VPI-5482 11202178_22_203: tandem domain, near sugar dehydrogenase, from Cytophaga fermentans IAM 14302, DSM 9555 0.000 0.068 556011_29_219: tandem domain, from Pirellula sp. 1 10359233_59_249: tandem domain, from Coraliomargarita akajimensis DSM 45221 0.952 4615012_42_228: single domain, near sugar dehydrogenase, from Lentisphaera araneosa HTCC2155 0.941 554419_49_246: with other domain, from Pirellula sp. 1 559162_54_228: tandem domain, from Pirellula sp. 1 1 /site single domain, from Coraliomargarita akajimensis DSM 45221 10356339_57_245 single domain, from Coraliomargarita akajimensis DSM 45221 with other domain, from Pirellula sp. 1 554685_116_314 with other domain, from Pirellula sp. 1 single domain, from Solibacter usitatus Ellin6076 2220515_8_228 single domain, from Solibacter usitatus Ellin6076 single domain, from Runella slithyformis LSU4, DSM 19594 11141775_41_262 single domain, from Runella slithyformis LSU4, DSM 19594 with redox domain, from Blastopirellula marina DSM 3645 2760957_28_228 with redox domain, from Blastopirellula marina DSM 3645 single domain, from Pirellula sp. 1 556853_51_260 single domain, from Pirellula sp. 1 single domain, from Verrucomicrobium spinosum DSM 4136 6004807_27_244 single domain, from Verrucomicrobium spinosum DSM 4136 single domain, from Chthoniobacter flavus Ellin428 6254877_31_231 single domain, from Chthoniobacter flavus Ellin428 single domain, from Chthoniobacter flavus Ellin428 6253153_22_242 single domain, from Chthoniobacter flavus Ellin428 single domain, from Pirellula sp. 1 559512_79_278 single domain, from Pirellula sp. 1 with redox domain, from Planctomyces brasiliensis DSM 5305 11293204_36_238 with redox domain, from Planctomyces brasiliensis DSM 5305 with redox domain, from Pirellula sp. 1 554416_28_225 with redox domain, from Pirellula sp. 1 with redox domain, from Lentisphaera araneosa HTCC2155 4611874_988_1186 with redox domain, from Lentisphaera araneosa HTCC2155 with redox domain, from Planctomyces brasiliensis DSM 5305 11296383_24_224 with redox domain, from Planctomyces brasiliensis DSM 5305 single domain, from Cyclobacterium marinum DSM 745 11227501_33_203 single domain, from Cyclobacterium marinum DSM 745 with redox domain, from Blastopirellula marina DSM 3645 2761067_1173_1341 with redox domain, from Blastopirellula marina DSM 3645 single domain, from Gemmata obscuriglobus UQM 2246 4911453_35_208 single domain, from Gemmata obscuriglobus UQM 2246 single domain, from Isosphaera pallida IS1B, ATCC 43644 11272043_27_202 single domain, from Isosphaera pallida IS1B, ATCC 43644 with other domain, from Bacteroides cellulosilyticus DSM 14838 6378172_468_664 with other domain, from Bacteroides cellulosilyticus DSM 14838 with redox domain, from Verrucomicrobium spinosum DSM 4136 6003860_25_205 with redox domain, from Verrucomicrobium spinosum DSM 4136 single domain, from Dyadobacter fermentans DSM 18053 7396463_28_209 single domain, from Dyadobacter fermentans DSM 18053 single domain, from Blastopirellula marina DSM 3645 2761156_23_206 single domain, from Blastopirellula marina DSM 3645 single domain, from Pirellula sp. 1 560752_63_281 single domain, from Pirellula sp. 1 with other domain, from Isosphaera pallida IS1B, ATCC 43644 11268538_332_511 with other domain, from Isosphaera pallida IS1B, ATCC 43644 with redox domain, from Chthoniobacter flavus Ellin428 6250794_21_205 with redox domain, from Chthoniobacter flavus Ellin428 single domain, from Spirosoma linguale DSM 74 10267460_32_215 single domain, from Spirosoma linguale DSM 74 single domain, from Solibacter usitatus Ellin6076 2221983_152_318 single domain, from Solibacter usitatus Ellin6076 single domain, from Gemmata obscuriglobus UQM 2246 4909784_48_228 single domain, from Gemmata obscuriglobus UQM 2246 single domain, from Verrucomicrobium spinosum DSM 4136 6001914_31_230 single domain, from Verrucomicrobium spinosum DSM 4136 single domain, from Lentisphaera araneosa HTCC2155 4616165_23_217 single domain, from Lentisphaera araneosa HTCC2155 with redox domain, from Pirellula sp. 1 554998_519_700 with redox domain, from Pirellula sp. 1 single domain, from Lentisphaera araneosa HTCC2155 4612229_39_228 single domain, from Lentisphaera araneosa HTCC2155 single domain, from Pirellula staleyi DSM 6068 10304809_24_215 single domain, from Pirellula staleyi DSM 6068 with redox domain, from Coraliomargarita akajimensis DSM 45221 10359243_331_522 with redox domain, from Coraliomargarita akajimensis DSM 45221 single domain, from Aquiflexum balticum BA160, DSM 16537 11127954_46_240 single domain, from Aquiflexum balticum BA160, DSM 16537 tandem domain, near sugar dehydrogenase, from Bacteroides thetaiotaomicron VPI-5482 352996_22_206 tandem domain, near sugar dehydrogenase, from Bacteroides thetaiotaomicron VPI-5482 tandem domain, near sugar dehydrogenase, from Cytophaga fermentans IAM 14302, DSM 9555 11202178_22_203 tandem domain, near sugar dehydrogenase, from Cytophaga fermentans IAM 14302, DSM 9555 tandem domain, from Pirellula sp. 1 556011_29_219 tandem domain, from Pirellula sp. 1 tandem domain, from Coraliomargarita akajimensis DSM 45221 10359233_59_249 tandem domain, from Coraliomargarita akajimensis DSM 45221 single domain, near sugar dehydrogenase, from Lentisphaera araneosa HTCC2155 4615012_42_228 single domain, near sugar dehydrogenase, from Lentisphaera araneosa HTCC2155 with other domain, from Pirellula sp. 1 554419_49_246 with other domain, from Pirellula sp. 1 tandem domain, from Pirellula sp. 1 559162_54_228 tandem domain, from Pirellula sp. 1 download SVG

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory