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Comment: DUF1080 is a family of hydrolases and includes putative 3-ketoglycoside hydrolases. The putative active site was identified from the structure of BT2157 (PDB:3osd). In the tree, BT2157 and other 3-ketoglycoside hydrolases are colored green, and endoglucanase THTE_1561 is in red. These members of DUF1080 were taken from MicrobesOnline (using hits to PFam PF06439.11 with 80 bits or higher), clustered at 60% identity to reduce the number of sequences, and aligned using hmmalign.

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0.798 10356339_57_245: single domain, from Coraliomargarita akajimensis DSM 45221 0.831 554685_116_314: with other domain, from Pirellula sp. 1 0.913 0.871 2220515_8_228: single domain, from Solibacter usitatus Ellin6076 11141775_41_262: single domain, from Runella slithyformis LSU4, DSM 19594 0.742 0.774 0.577 2760957_28_228: with redox domain, from Blastopirellula marina DSM 3645 0.920 0.941 0.518 556853_51_260: single domain, from Pirellula sp. 1 6004807_27_244: single domain, from Verrucomicrobium spinosum DSM 4136 6254877_31_231: single domain, from Chthoniobacter flavus Ellin428 6253153_22_242: single domain, from Chthoniobacter flavus Ellin428 559512_79_278: single domain, from Pirellula sp. 1 0.936 11293204_36_238: with redox domain, from Planctomyces brasiliensis DSM 5305 0.887 0.870 554416_28_225: with redox domain, from Pirellula sp. 1 4611874_988_1186: with redox domain, from Lentisphaera araneosa HTCC2155 11296383_24_224: with redox domain, from Planctomyces brasiliensis DSM 5305 1 /site single domain, from Coraliomargarita akajimensis DSM 45221 10356339_57_245 single domain, from Coraliomargarita akajimensis DSM 45221 with other domain, from Pirellula sp. 1 554685_116_314 with other domain, from Pirellula sp. 1 single domain, from Solibacter usitatus Ellin6076 2220515_8_228 single domain, from Solibacter usitatus Ellin6076 single domain, from Runella slithyformis LSU4, DSM 19594 11141775_41_262 single domain, from Runella slithyformis LSU4, DSM 19594 with redox domain, from Blastopirellula marina DSM 3645 2760957_28_228 with redox domain, from Blastopirellula marina DSM 3645 single domain, from Pirellula sp. 1 556853_51_260 single domain, from Pirellula sp. 1 single domain, from Verrucomicrobium spinosum DSM 4136 6004807_27_244 single domain, from Verrucomicrobium spinosum DSM 4136 single domain, from Chthoniobacter flavus Ellin428 6254877_31_231 single domain, from Chthoniobacter flavus Ellin428 single domain, from Chthoniobacter flavus Ellin428 6253153_22_242 single domain, from Chthoniobacter flavus Ellin428 single domain, from Pirellula sp. 1 559512_79_278 single domain, from Pirellula sp. 1 with redox domain, from Planctomyces brasiliensis DSM 5305 11293204_36_238 with redox domain, from Planctomyces brasiliensis DSM 5305 with redox domain, from Pirellula sp. 1 554416_28_225 with redox domain, from Pirellula sp. 1 with redox domain, from Lentisphaera araneosa HTCC2155 4611874_988_1186 with redox domain, from Lentisphaera araneosa HTCC2155 with redox domain, from Planctomyces brasiliensis DSM 5305 11296383_24_224 with redox domain, from Planctomyces brasiliensis DSM 5305 download SVG

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory