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Comment: DUF1080 is a family of hydrolases and includes putative 3-ketoglycoside hydrolases. The putative active site was identified from the structure of BT2157 (PDB:3osd). In the tree, BT2157 and other 3-ketoglycoside hydrolases are colored green, and endoglucanase THTE_1561 is in red. These members of DUF1080 were taken from MicrobesOnline (using hits to PFam PF06439.11 with 80 bits or higher), clustered at 60% identity to reduce the number of sequences, and aligned using hmmalign.

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0.932 0.659 0.975 10270655_87_292: single domain, from Salinibacter ruber 0.917 11261816_60_268: single domain, from Flexibacter tractuosus DSM 4126 0.355 0.972 3723687_51_268: single domain, from Parabacteroides distasonis ATCC 8503 BT2157: single domain 3-ketoglycoside hydrolase from Bacteroides thetaiotaomicron VPI-5482 3722639_36_242: single domain, from Parabacteroides distasonis ATCC 8503 0.828 0.849 0.905 0.451 0.427 0.957 5635396_34_225: single domain, from Phenylobacterium zucineum HLK1 5650395_26_219: single domain, from Opitutus terrae PB90-1 0.840 4592619_38_216: single domain, from Planctomyces maris DSM 8797 0.945 2221277_10_210: single domain, from Solibacter usitatus Ellin6076 2224300_9_241: single domain, from Solibacter usitatus Ellin6076 0.854 0.989 6254732_35_232: single domain, from Chthoniobacter flavus Ellin428 0.945 557204_55_252: single domain, from Pirellula sp. 1 4590561_54_263: with other domain, from Planctomyces maris DSM 8797 0.987 2107363_45_249: single domain, near sugar dehydrogenase, from Gramella forsetii KT0803 2766526_24_229: single domain, from Flavobacteriales bacterium HTCC2170 0.747 0.932 0.920 0.259 0.802 0.820 11127178_250_458: tandem domain, near sugar dehydrogenase, from Aquiflexum balticum BA160, DSM 16537 11135123_241_454: tandem domain, from Haliscomenobacter hydrossis O, DSM 1100 0.324 10267694_39_236: single domain, near sugar dehydrogenase, from Spirosoma linguale DSM 74 0.859 11144788_324_528: with other domain, from Runella slithyformis LSU4, DSM 19594 11231190_33_234: single domain, from Cyclobacterium marinum DSM 745 11142916_35_241: single domain, near sugar dehydrogenase, from Runella slithyformis LSU4, DSM 19594 0.710 6248949_36_232: single domain, from Chthoniobacter flavus Ellin428 0.929 6248947_52_255: single domain, from Chthoniobacter flavus Ellin428 6254960_116_292: single domain, from Chthoniobacter flavus Ellin428 0.936 6002492_41_212: single domain, from Verrucomicrobium spinosum DSM 4136 0.879 10356681_30_214: single domain, from Coraliomargarita akajimensis DSM 45221 10359233_256_442: tandem domain, from Coraliomargarita akajimensis DSM 45221 0.958 0.953 11036482_44_240: single domain, from Niastella koreensis GR20-10, DSM 17620 0.953 0.948 11129142_59_261: single domain, near sugar dehydrogenase, from Aquiflexum balticum BA160, DSM 16537 11227662_34_258: single domain, near sugar dehydrogenase, from Cyclobacterium marinum DSM 745 0.866 0.672 3722681_42_255: single domain, near sugar dehydrogenase, from Parabacteroides distasonis ATCC 8503 11000384_42_248: tandem domain, from Alistipes finegoldii AHN 2437, DSM 17242 7460989_37_237: single domain, from Pedobacter heparinus DSM 2366 10265754_21_224: single domain, from Spirosoma linguale DSM 74 0.915 7058297_78_271: single domain, from Gemmatimonas aurantiaca T-27 0.835 3558251_5_190: single domain, from Pseudomonas stutzeri A1501 5650184_80_251: single domain, from Opitutus terrae PB90-1 0.957 11132995_45_251: single domain, from Haliscomenobacter hydrossis O, DSM 1100 0.943 6806740_40_249: single domain, from Acidobacterium capsulatum ATCC 51196 0.601 11036133_59_263: single domain, from Niastella koreensis GR20-10, DSM 17620 11075721_6_207: single domain, from Pontibacter actiniarum KMM 6156, DSM 19842 0.666 4613982_36_229: single domain, from Lentisphaera araneosa HTCC2155 0.776 4613218_30_221: single domain, from Lentisphaera araneosa HTCC2155 7399615_36_237: single domain, from Dyadobacter fermentans DSM 18053 1 /site single domain, from Salinibacter ruber 10270655_87_292 single domain, from Salinibacter ruber single domain, from Flexibacter tractuosus DSM 4126 11261816_60_268 single domain, from Flexibacter tractuosus DSM 4126 single domain, from Parabacteroides distasonis ATCC 8503 3723687_51_268 single domain, from Parabacteroides distasonis ATCC 8503 single domain 3-ketoglycoside hydrolase from Bacteroides thetaiotaomicron VPI-5482 BT2157 single domain 3-ketoglycoside hydrolase from Bacteroides thetaiotaomicron VPI-5482 single domain, from Parabacteroides distasonis ATCC 8503 3722639_36_242 single domain, from Parabacteroides distasonis ATCC 8503 single domain, from Phenylobacterium zucineum HLK1 5635396_34_225 single domain, from Phenylobacterium zucineum HLK1 single domain, from Opitutus terrae PB90-1 5650395_26_219 single domain, from Opitutus terrae PB90-1 single domain, from Planctomyces maris DSM 8797 4592619_38_216 single domain, from Planctomyces maris DSM 8797 single domain, from Solibacter usitatus Ellin6076 2221277_10_210 single domain, from Solibacter usitatus Ellin6076 single domain, from Solibacter usitatus Ellin6076 2224300_9_241 single domain, from Solibacter usitatus Ellin6076 single domain, from Chthoniobacter flavus Ellin428 6254732_35_232 single domain, from Chthoniobacter flavus Ellin428 single domain, from Pirellula sp. 1 557204_55_252 single domain, from Pirellula sp. 1 with other domain, from Planctomyces maris DSM 8797 4590561_54_263 with other domain, from Planctomyces maris DSM 8797 single domain, near sugar dehydrogenase, from Gramella forsetii KT0803 2107363_45_249 single domain, near sugar dehydrogenase, from Gramella forsetii KT0803 single domain, from Flavobacteriales bacterium HTCC2170 2766526_24_229 single domain, from Flavobacteriales bacterium HTCC2170 tandem domain, near sugar dehydrogenase, from Aquiflexum balticum BA160, DSM 16537 11127178_250_458 tandem domain, near sugar dehydrogenase, from Aquiflexum balticum BA160, DSM 16537 tandem domain, from Haliscomenobacter hydrossis O, DSM 1100 11135123_241_454 tandem domain, from Haliscomenobacter hydrossis O, DSM 1100 single domain, near sugar dehydrogenase, from Spirosoma linguale DSM 74 10267694_39_236 single domain, near sugar dehydrogenase, from Spirosoma linguale DSM 74 with other domain, from Runella slithyformis LSU4, DSM 19594 11144788_324_528 with other domain, from Runella slithyformis LSU4, DSM 19594 single domain, from Cyclobacterium marinum DSM 745 11231190_33_234 single domain, from Cyclobacterium marinum DSM 745 single domain, near sugar dehydrogenase, from Runella slithyformis LSU4, DSM 19594 11142916_35_241 single domain, near sugar dehydrogenase, from Runella slithyformis LSU4, DSM 19594 single domain, from Chthoniobacter flavus Ellin428 6248949_36_232 single domain, from Chthoniobacter flavus Ellin428 single domain, from Chthoniobacter flavus Ellin428 6248947_52_255 single domain, from Chthoniobacter flavus Ellin428 single domain, from Chthoniobacter flavus Ellin428 6254960_116_292 single domain, from Chthoniobacter flavus Ellin428 single domain, from Verrucomicrobium spinosum DSM 4136 6002492_41_212 single domain, from Verrucomicrobium spinosum DSM 4136 single domain, from Coraliomargarita akajimensis DSM 45221 10356681_30_214 single domain, from Coraliomargarita akajimensis DSM 45221 tandem domain, from Coraliomargarita akajimensis DSM 45221 10359233_256_442 tandem domain, from Coraliomargarita akajimensis DSM 45221 single domain, from Niastella koreensis GR20-10, DSM 17620 11036482_44_240 single domain, from Niastella koreensis GR20-10, DSM 17620 single domain, near sugar dehydrogenase, from Aquiflexum balticum BA160, DSM 16537 11129142_59_261 single domain, near sugar dehydrogenase, from Aquiflexum balticum BA160, DSM 16537 single domain, near sugar dehydrogenase, from Cyclobacterium marinum DSM 745 11227662_34_258 single domain, near sugar dehydrogenase, from Cyclobacterium marinum DSM 745 single domain, near sugar dehydrogenase, from Parabacteroides distasonis ATCC 8503 3722681_42_255 single domain, near sugar dehydrogenase, from Parabacteroides distasonis ATCC 8503 tandem domain, from Alistipes finegoldii AHN 2437, DSM 17242 11000384_42_248 tandem domain, from Alistipes finegoldii AHN 2437, DSM 17242 single domain, from Pedobacter heparinus DSM 2366 7460989_37_237 single domain, from Pedobacter heparinus DSM 2366 single domain, from Spirosoma linguale DSM 74 10265754_21_224 single domain, from Spirosoma linguale DSM 74 single domain, from Gemmatimonas aurantiaca T-27 7058297_78_271 single domain, from Gemmatimonas aurantiaca T-27 single domain, from Pseudomonas stutzeri A1501 3558251_5_190 single domain, from Pseudomonas stutzeri A1501 single domain, from Opitutus terrae PB90-1 5650184_80_251 single domain, from Opitutus terrae PB90-1 single domain, from Haliscomenobacter hydrossis O, DSM 1100 11132995_45_251 single domain, from Haliscomenobacter hydrossis O, DSM 1100 single domain, from Acidobacterium capsulatum ATCC 51196 6806740_40_249 single domain, from Acidobacterium capsulatum ATCC 51196 single domain, from Niastella koreensis GR20-10, DSM 17620 11036133_59_263 single domain, from Niastella koreensis GR20-10, DSM 17620 single domain, from Pontibacter actiniarum KMM 6156, DSM 19842 11075721_6_207 single domain, from Pontibacter actiniarum KMM 6156, DSM 19842 single domain, from Lentisphaera araneosa HTCC2155 4613982_36_229 single domain, from Lentisphaera araneosa HTCC2155 single domain, from Lentisphaera araneosa HTCC2155 4613218_30_221 single domain, from Lentisphaera araneosa HTCC2155 single domain, from Dyadobacter fermentans DSM 18053 7399615_36_237 single domain, from Dyadobacter fermentans DSM 18053 download SVG

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory