Sites on a Tree

 

Searching for up to 100 curated homologs for 10356726_29_240 (212 a.a.)

Found high-coverage hits (≥70%) to 4 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Echvi_2921 predicted 3-ketoglycoside hydrolase (DUF1080) from Echinicola vietnamensis KMM 6221, DSM 17526
    35% identity, 76% coverage of query (76.6 bits)

4qhzC / A6LIT1 Crystal structure of a putative glycosyl hydrolase (bdi_3914) from parabacteroides distasonis atcc 8503 at 2.13 a resolution
    31% identity, 75% coverage of query (75.9 bits)

CCNA_01698 predicted periplasmic 3-ketoglycoside hydrolase (DUF1080) from Caulobacter crescentus NA1000
    30% identity, 74% coverage of query (68.9 bits)

Build an alignment

Build an alignment for 10356726_29_240 and 3 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

CA265_RS22975 periplasmic 3-ketotrehalose hydrolase (DUF1080) from Pedobacter sp. GW460-11-11-14-LB5
    27% identity, 86% coverage of query (68.2 bits)

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory