Sites on a Tree

 

Searching for up to 100 curated homologs for 11127178_250_458 (209 a.a.)

Found high-coverage hits (≥70%) to 2 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

BT2157 periplasmic 3-ketoglycoside hydrolase from Bacteroides thetaiotaomicron VPI-5482
BT_2157 / Q8A5T1 3'-ketodisaccharide hydrolase (EC 3.2.1.218) from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) (see 3 papers)
    37% identity, 100% coverage of query (130 bits)

Build an alignment

Build an alignment for 11127178_250_458 and 1 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Additional hits (identity < 30%)

CCNA_01705 periplasmic 3'-ketolactose hydrolase from Caulobacter crescentus NA1000
klhA / A0A0H3C779 3'-ketolactose hydrolase from Caulobacter vibrioides (strain NA1000 / CB15N) (see 4 papers)
    25% identity, 100% coverage of query (53.5 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory