Sites on a Tree

 

Searching for up to 100 curated homologs for 13241 (77 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

CRZ1_CRYNH / J9VE33 Transcriptional regulator CRZ1 from Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) (Filobasidiella neoformans var. grubii) (see 9 papers)
    59% identity, 100% coverage of query (110 bits)

CRZ1_CANAL / Q5A4H5 Transcriptional regulator CRZ1; Calcineurin-responsive zinc finger protein 1 from Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast) (see 7 papers)
CRZ1 potential zinc finger protein from Candida albicans (see 7 papers)
    48% identity, 100% coverage of query (91.3 bits)

PRZ1_SCHPO / Q09838 Transcriptional regulator prz1; Pbp1-responsive zinc finger protein 1 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see 2 papers)
prz1 / RF|NP_593073.1 calcineurin responsive transcription factor Prz1 from Schizosaccharomyces pombe (see 3 papers)
    47% identity, 100% coverage of query (90.5 bits)

CRZ1_YEAST / P53968 Transcriptional regulator CRZ1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 4 papers)
    49% identity, 100% coverage of query (90.1 bits)

CRZA_ASPFU / Q4WJ81 C2H2 finger domain transcription factor crzA from Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) (Neosartorya fumigata) (see 6 papers)
    50% identity, 100% coverage of query (87.8 bits)

crzA putative transcription factor CrzA from Emericella nidulans (see 2 papers)
    50% identity, 100% coverage of query (86.7 bits)

MgCRZ1 C2H2 type zinc finger domain-containing protein from Magnaporthe grisea 70-15 (see paper)
    50% identity, 100% coverage of query (84.7 bits)

CRZ2_CANAL / Q59SN6 Transcriptional regulator CRZ2; Calcineurin-responsive zinc finger protein 2 from Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast) (see 4 papers)
    45% identity, 100% coverage of query (84.0 bits)

CRZ2 potential zinc finger protein from Candida albicans (see 2 papers)
    45% identity, 100% coverage of query (83.6 bits)

KLF11_MOUSE / Q8K1S5 Krueppel-like factor 11; TGFB-inducible early growth response protein 2b; Transforming growth factor-beta-inducible early growth response protein 3; TGFB-inducible early growth response protein 3; TIEG-3 from Mus musculus (Mouse) (see 4 papers)
    43% identity, 100% coverage of query (82.8 bits)

KLF8_HUMAN / O95600 Krueppel-like factor 8; Basic krueppel-like factor 3; Zinc finger protein 741 from Homo sapiens (Human) (see 4 papers)
    43% identity, 94% coverage of query (82.8 bits)

KLF10_HUMAN / Q13118 Krueppel-like factor 10; EGR-alpha; Transforming growth factor-beta-inducible early growth response protein 1; TGFB-inducible early growth response protein 1; TIEG-1 from Homo sapiens (Human) (see 3 papers)
    43% identity, 94% coverage of query (82.0 bits)

KLF11_HUMAN / O14901 Krueppel-like factor 11; Transforming growth factor-beta-inducible early growth response protein 2; TGFB-inducible early growth response protein 2; TIEG-2 from Homo sapiens (Human) (see 4 papers)
    43% identity, 100% coverage of query (82.0 bits)

KLF10_RAT / O08876 Krueppel-like factor 10; Transforming growth factor-beta-inducible early growth response protein 1; TGFB-inducible early growth response protein 1; TIEG-1; Zinc finger transcription factor homolog CPG20 from Rattus norvegicus (Rat) (see paper)
    43% identity, 94% coverage of query (81.6 bits)

KLF10_MOUSE / O89091 Krueppel-like factor 10; GDNF-inducible factor; Transcription factor GIF; mGIF; Transforming growth factor-beta-inducible early growth response protein 1; TGFB-inducible early growth response protein 1; TIEG-1 from Mus musculus (Mouse) (see 3 papers)
    43% identity, 94% coverage of query (81.3 bits)

KLF17_HUMAN / Q5JT82 Krueppel-like factor 17; Zinc finger protein 393 from Homo sapiens (Human) (see paper)
    43% identity, 96% coverage of query (80.9 bits)

KLF3_MOUSE / Q60980 Krueppel-like factor 3; Basic krueppel-like factor; CACCC-box-binding protein BKLF; TEF-2 from Mus musculus (Mouse) (see 3 papers)
    45% identity, 92% coverage of query (80.1 bits)

KLF5_HUMAN / Q13887 Krueppel-like factor 5; Basic transcription element-binding protein 2; BTE-binding protein 2; Colon krueppel-like factor; GC-box-binding protein 2; Intestinal-enriched krueppel-like factor; Transcription factor BTEB2 from Homo sapiens (Human) (see 4 papers)
    46% identity, 94% coverage of query (79.7 bits)

KLF3_HUMAN / P57682 Krueppel-like factor 3; Basic krueppel-like factor; CACCC-box-binding protein BKLF; TEF-2 from Homo sapiens (Human) (see paper)
    45% identity, 92% coverage of query (79.3 bits)

KLF12_HUMAN / Q9Y4X4 Krueppel-like factor 12; Transcriptional repressor AP-2rep from Homo sapiens (Human) (see paper)
    47% identity, 95% coverage of query (78.6 bits)

ACE2 potential zinc finger transcription factor from Candida albicans (see 4 papers)
    46% identity, 94% coverage of query (78.2 bits)

ACE2_YEAST / P21192 Metallothionein expression activator from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see paper)
    47% identity, 94% coverage of query (78.2 bits)

ACE2_CANAL / Q59RR0 Cell wall transcription factor ACE2 from Candida albicans (strain SC5314 / ATCC MYA-2876) (Yeast) (see 7 papers)
    46% identity, 94% coverage of query (78.2 bits)

KLF1_CAEEL / Q9TZ64 Kruppel-like factor 1 from Caenorhabditis elegans (see 3 papers)
    47% identity, 94% coverage of query (77.8 bits)

KLFL_DROME / Q8MR37 Krueppel-like factor luna from Drosophila melanogaster (Fruit fly) (see 2 papers)
    46% identity, 94% coverage of query (77.4 bits)

SWI5_YEAST / P08153 Transcriptional factor SWI5 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 2 papers)
    47% identity, 94% coverage of query (77.4 bits)

ACE2_CANGA / Q6FJQ9 Cell wall transcription factor ACE2 from Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) (Yeast) (Nakaseomyces glabratus) (see 4 papers)
    43% identity, 94% coverage of query (75.9 bits)

nsdC NSDC from Emericella nidulans (see paper)
    47% identity, 97% coverage of query (74.7 bits)

SNAI1_XENLA / P19382 Protein snail homolog Sna; Protein Xsnail; Protein xSna from Xenopus laevis (African clawed frog) (see 4 papers)
    43% identity, 99% coverage of query (74.3 bits)

ZIC3_MOUSE / Q62521 Zinc finger protein ZIC 3; Zinc finger protein of the cerebellum 3 from Mus musculus (Mouse) (see 4 papers)
    42% identity, 94% coverage of query (73.9 bits)

ZIC3_HUMAN / O60481 Zinc finger protein ZIC 3; Zinc finger protein 203; Zinc finger protein of the cerebellum 3 from Homo sapiens (Human) (see 7 papers)
    42% identity, 94% coverage of query (73.9 bits)

KRUP_DROME / P07247 Protein krueppel from Drosophila melanogaster (Fruit fly) (see paper)
    44% identity, 100% coverage of query (73.9 bits)

SP2_HUMAN / Q02086 Transcription factor Sp2 from Homo sapiens (Human) (see paper)
    38% identity, 99% coverage of query (73.9 bits)

ZBT24_HUMAN / O43167 Zinc finger and BTB domain-containing protein 24; Zinc finger protein 450 from Homo sapiens (Human) (see 2 papers)
    44% identity, 100% coverage of query (73.6 bits)

SPTF3_CAEEL / Q9XW26 Specificity protein transcription factor 3 from Caenorhabditis elegans (see 3 papers)
    37% identity, 99% coverage of query (73.2 bits)

SP1_HUMAN / P08047 Transcription factor Sp1 from Homo sapiens (Human) (see 35 papers)
    36% identity, 99% coverage of query (73.2 bits)

1meyF Crystal structure of a designed zinc finger protein bound to DNA (see paper)
    43% identity, 100% coverage of query (73.2 bits)

1meyC Crystal structure of a designed zinc finger protein bound to DNA
    43% identity, 100% coverage of query (73.2 bits)

ZIC2A_XENLA / Q91689 Zinc finger protein ZIC 2-A; Zinc finger DNA-binding protein fZic; Zinc finger protein ZIC 2; XlZic2; xZic2; Zinc finger protein of the cerebellum 2-A from Xenopus laevis (African clawed frog) (see 5 papers)
    40% identity, 94% coverage of query (72.8 bits)

SP1_MOUSE / O89090 Transcription factor Sp1; Specificity protein 1 from Mus musculus (Mouse) (see 5 papers)
    36% identity, 99% coverage of query (72.8 bits)

SP1_RAT / Q01714 Transcription factor Sp1 from Rattus norvegicus (Rat) (see 2 papers)
    36% identity, 99% coverage of query (72.8 bits)

ZIC1_XENLA / O73689 Zinc finger protein ZIC 1; XZic1; XlZic1; ODD-paired-like; Xopl; ZIC-related protein 1; ZIC-r1; Zinc finger protein of the cerebellum 1 from Xenopus laevis (African clawed frog) (see 10 papers)
    42% identity, 94% coverage of query (72.8 bits)

SNAI3_MOUSE / Q9QY31 Zinc finger protein SNAI3; Protein snail homolog 3; Snail-related gene from muscle cells; Zinc finger protein 293 from Mus musculus (Mouse) (see paper)
    43% identity, 99% coverage of query (72.4 bits)

SP4_HUMAN / Q02446 Transcription factor Sp4; SPR-1 from Homo sapiens (Human) (see paper)
    36% identity, 96% coverage of query (72.0 bits)

ZN649_HUMAN / Q9BS31 Zinc finger protein 649 from Homo sapiens (Human) (see paper)
    48% identity, 97% coverage of query (71.6 bits)

SP3_HUMAN / Q02447 Transcription factor Sp3; SPR-2 from Homo sapiens (Human) (see 15 papers)
    36% identity, 99% coverage of query (71.6 bits)

SP3_CHICK / Q90WR8 Transcription factor Sp3 from Gallus gallus (Chicken) (see paper)
    36% identity, 99% coverage of query (71.6 bits)

SNAI1_MOUSE / Q02085 Zinc finger protein SNAI1; Protein snail homolog 1; Protein sna from Mus musculus (Mouse) (see 8 papers)
    43% identity, 99% coverage of query (71.6 bits)

SNAI2_RAT / O08954 Zinc finger protein SNAI2; Neural crest transcription factor Slug; Protein snail homolog 2 from Rattus norvegicus (Rat) (see paper)
    42% identity, 99% coverage of query (71.6 bits)

SNAI2_HUMAN / O43623 Zinc finger protein SNAI2; Neural crest transcription factor Slug; Protein snail homolog 2 from Homo sapiens (Human) (see 11 papers)
    42% identity, 99% coverage of query (71.6 bits)

2ebtA / Q13887 Solution structure of three tandem repeats of zf-c2h2 domains from human kruppel-like factor 5
    46% identity, 94% coverage of query (71.6 bits)

SNAI2_XENLA / Q91924 Zinc finger protein SNAI2; Protein slug-alpha; Protein snail homolog 2; Snail protein homolog Slug; xSlu from Xenopus laevis (African clawed frog) (see 5 papers)
    42% identity, 99% coverage of query (71.6 bits)

SP3_MOUSE / O70494 Transcription factor Sp3 from Mus musculus (Mouse) (see paper)
    36% identity, 99% coverage of query (71.6 bits)

ZBT24_MOUSE / Q80X44 Zinc finger and BTB domain-containing protein 24; Bone morphogenetic protein-induced factor 1; Brain-specific protein 1; Zinc finger protein 450 from Mus musculus (Mouse) (see paper)
    44% identity, 100% coverage of query (71.2 bits)

KLF17_MOUSE / Q8CFA7 Krueppel-like factor 17; Germ cell-specific zinc finger protein; Zinc finger protein 393 from Mus musculus (Mouse) (see 2 papers)
    39% identity, 100% coverage of query (71.2 bits)

DAR1_DROME / Q9VZN4 Dendritic arbor reduction protein 1 from Drosophila melanogaster (Fruit fly) (see 2 papers)
    40% identity, 94% coverage of query (71.2 bits)

ZIC3_XENLA / O57311 Zinc finger protein ZIC 3; XZic3; XlZic3; Zinc finger protein Zic3-A; Zinc finger protein of the cerebellum 3 from Xenopus laevis (African clawed frog) (see 9 papers)
    42% identity, 94% coverage of query (71.2 bits)

snail / CAE00182.1 snail protein from Cupiennius salei (see paper)
    41% identity, 97% coverage of query (70.9 bits)

AZF1_YEAST / P41696 Transcription factor AZF1; asparagine-rich zinc-finger protein 1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 9 papers)
    41% identity, 100% coverage of query (70.5 bits)

KLF15_HUMAN / Q9UIH9 Krueppel-like factor 15; Kidney-enriched krueppel-like factor from Homo sapiens (Human) (see 9 papers)
    39% identity, 94% coverage of query (70.5 bits)

Z354A_MOUSE / Q61751 Zinc finger protein 354A; Kidney, ischemia, and developmentally-regulated protein 1; Renal transcription factor Kid-1; Transcription factor 17; TCF-17 from Mus musculus (Mouse) (see paper)
    43% identity, 100% coverage of query (70.5 bits)

Z354B_MOUSE / Q9QXT9 Zinc finger protein 354B; Kidney, ischemia, and developmentally-regulated protein 2 from Mus musculus (Mouse) (see 2 papers)
    43% identity, 100% coverage of query (70.5 bits)

SNAI1_HUMAN / O95863 Zinc finger protein SNAI1; Protein snail homolog 1; Protein sna from Homo sapiens (Human) (see 27 papers)
    43% identity, 99% coverage of query (70.1 bits)

ZIC4_XENLA / A0JC51 Zinc finger protein ZIC 4; XlZic4; Zinc finger protein of the cerebellum 4 from Xenopus laevis (African clawed frog) (see paper)
    41% identity, 94% coverage of query (70.1 bits)

KLF15_MOUSE / Q9EPW2 Krueppel-like factor 15; Cardiovascular Krueppel-like factor from Mus musculus (Mouse) (see 7 papers)
    39% identity, 94% coverage of query (70.1 bits)

KLF7_MOUSE / Q99JB0 Krueppel-like factor 7 from Mus musculus (Mouse) (see 5 papers)
    46% identity, 94% coverage of query (69.7 bits)

KLF7_HUMAN / O75840 Krueppel-like factor 7; Ubiquitous krueppel-like factor from Homo sapiens (Human) (see 4 papers)
    46% identity, 94% coverage of query (69.7 bits)

6ml4A / Q80X44 Btb24 zinc fingers 4-8 with 19+1mer DNA oligonucleotide (sequence 3) (see paper)
    44% identity, 100% coverage of query (69.7 bits)

ZIC1_CHICK / Q8JJC0 Zinc finger protein ZIC 1; Zinc finger protein of the cerebellum 1 from Gallus gallus (Chicken) (see paper)
    41% identity, 100% coverage of query (69.7 bits)

ZIC1_HUMAN / Q15915 Zinc finger protein ZIC 1; Zinc finger protein 201; Zinc finger protein of the cerebellum 1 from Homo sapiens (Human) (see 3 papers)
    41% identity, 100% coverage of query (69.3 bits)

ZIC1_MOUSE / P46684 Zinc finger protein ZIC 1; Zinc finger protein of the cerebellum 1 from Mus musculus (Mouse) (see 7 papers)
    41% identity, 100% coverage of query (69.3 bits)

KLF6_HUMAN / Q99612 Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9 from Homo sapiens (Human) (see 4 papers)
    46% identity, 94% coverage of query (69.3 bits)

Z354A_HUMAN / O60765 Zinc finger protein 354A; Transcription factor 17; TCF-17; Zinc finger protein eZNF from Homo sapiens (Human) (see paper)
    42% identity, 100% coverage of query (68.9 bits)

2i13B / Q07230 Aart, a six finger zinc finger designed to recognize ann triplets (see paper)
    43% identity, 100% coverage of query (68.9 bits)

ZN256_HUMAN / Q9Y2P7 Zinc finger protein 256; Bone marrow zinc finger 3; BMZF-3 from Homo sapiens (Human) (see paper)
    43% identity, 97% coverage of query (68.9 bits)

2i13A / Q07230 Aart, a six finger zinc finger designed to recognize ann triplets (see paper)
    43% identity, 100% coverage of query (68.6 bits)

ZIC2_MOUSE / Q62520 Zinc finger protein ZIC 2; Zinc finger protein of the cerebellum 2 from Mus musculus (Mouse) (see 12 papers)
    39% identity, 100% coverage of query (68.6 bits)

KLF1_DANRE / Q90XE6 Kruppel-like factor 1; Erythroid krueppel-like transcription factor; Kruppel-like factor d from Danio rerio (Zebrafish) (Brachydanio rerio) (see 3 papers)
    43% identity, 94% coverage of query (68.2 bits)

ZIC2_HUMAN / O95409 Zinc finger protein ZIC 2; Zinc finger protein of the cerebellum 2 from Homo sapiens (Human) (see 6 papers)
    39% identity, 100% coverage of query (68.2 bits)

8e3eF / O95365 Zbtb7a zinc finger domain bound to DNA duplex containing cast sequence (#10) (see paper)
    47% identity, 100% coverage of query (68.2 bits)

ZN300_HUMAN / Q96RE9 Zinc finger protein 300 from Homo sapiens (Human) (see 3 papers)
    40% identity, 100% coverage of query (68.2 bits)

ZBT7A_HUMAN / O95365 Zinc finger and BTB domain-containing protein 7A; Factor binding IST protein 1; FBI-1; Factor that binds to inducer of short transcripts protein 1; HIV-1 1st-binding protein 1; Leukemia/lymphoma-related factor; POZ and Krueppel erythroid myeloid ontogenic factor; POK erythroid myeloid ontogenic factor; Pokemon; Pokemon 1; TTF-I-interacting peptide 21; TIP21; Zinc finger protein 857A from Homo sapiens (Human) (see 15 papers)
    47% identity, 100% coverage of query (68.2 bits)

ZBT7A_MOUSE / O88939 Zinc finger and BTB domain-containing protein 7A; Leukemia/lymphoma-related factor; POZ and Krueppel erythroid myeloid ontogenic factor; POK erythroid myeloid ontogenic factor; Pokemon from Mus musculus (Mouse) (see 8 papers)
    47% identity, 100% coverage of query (67.8 bits)

ZBT7A_RAT / Q9QZ48 Zinc finger and BTB domain-containing protein 7A; Leukemia/lymphoma-related factor; Osteoclast-derived zinc finger protein from Rattus norvegicus (Rat) (see paper)
    47% identity, 100% coverage of query (67.8 bits)

ZNF93_HUMAN / P35789 Zinc finger protein 93; Zinc finger protein 505; Zinc finger protein HTF34 from Homo sapiens (Human) (see paper)
    40% identity, 100% coverage of query (67.8 bits)

ZN768_HUMAN / Q9H5H4 Zinc finger protein 768 from Homo sapiens (Human) (see 2 papers)
    45% identity, 99% coverage of query (67.4 bits)

ZN658_HUMAN / Q5TYW1 Zinc finger protein 658 from Homo sapiens (Human) (see paper)
    43% identity, 100% coverage of query (67.4 bits)

ESCA_DROME / P25932 Protein escargot; Protein fleabag from Drosophila melanogaster (Fruit fly) (see 7 papers)
    40% identity, 97% coverage of query (67.4 bits)

LIN29_CAEEL / G5EGB2 Zinc finger transcription factor lin-29; abnormal cell lineage 29 from Caenorhabditis elegans (see 11 papers)
    39% identity, 97% coverage of query (67.0 bits)

KLF1_HUMAN / Q13351 Krueppel-like factor 1; Erythroid krueppel-like transcription factor; EKLF from Homo sapiens (Human) (see 17 papers)
    44% identity, 94% coverage of query (67.0 bits)

KLF4_MOUSE / Q60793 Krueppel-like factor 4; Epithelial zinc finger protein EZF; Gut-enriched krueppel-like factor from Mus musculus (Mouse) (see 12 papers)
    44% identity, 94% coverage of query (67.0 bits)

KLF4_HUMAN / O43474 Krueppel-like factor 4; Epithelial zinc finger protein EZF; Gut-enriched krueppel-like factor from Homo sapiens (Human) (see 7 papers)
    44% identity, 94% coverage of query (67.0 bits)

ZSC10_HUMAN / Q96SZ4 Zinc finger and SCAN domain-containing protein 10; Zinc finger protein 206 from Homo sapiens (Human) (see 2 papers)
    44% identity, 100% coverage of query (67.0 bits)

KLF2_MOUSE / Q60843 Krueppel-like factor 2; Lung krueppel-like factor from Mus musculus (Mouse) (see 2 papers)
    46% identity, 94% coverage of query (66.6 bits)

KLF1_MOUSE / P46099 Krueppel-like factor 1; Erythroid krueppel-like transcription factor; EKLF from Mus musculus (Mouse) (see 4 papers)
    45% identity, 96% coverage of query (66.6 bits)

TYY1_HUMAN / P25490 Transcriptional repressor protein YY1; Delta transcription factor; INO80 complex subunit S; NF-E1; Yin and yang 1; YY-1 from Homo sapiens (Human) (see 18 papers)
    38% identity, 99% coverage of query (66.2 bits)

5ke9A / Q60793 Mouse klf4 e446p znf1-3 and tpg/cpa sequence DNA complex structure (see paper)
    44% identity, 94% coverage of query (65.5 bits)

SP9_HUMAN / P0CG40 Transcription factor Sp9 from Homo sapiens (Human) (see paper)
    36% identity, 94% coverage of query (65.5 bits)

ZN568_MOUSE / E9PYI1 Zinc finger protein 568 from Mus musculus (Mouse) (see 6 papers)
    41% identity, 97% coverage of query (65.1 bits)

ZICH2_CAEEL / Q7JNM3 Zinc finger transcription factor ref-2; Regulator of fusion 2; Zic transcription factor ref-2 from Caenorhabditis elegans (see 4 papers)
    37% identity, 100% coverage of query (65.1 bits)

Build an alignment

Build an alignment for 13241 and 100 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory