Searching for up to 100 curated homologs for 14358 FitnessBrowser__Keio:14358 (256 a.a.)
Found high-coverage hits (≥70%) to 40 curated proteins.
Removed hits that are identical to the query, leaving 39
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
YAFV_ECOBD / A0A140NDS5 Omega-amidase YafV; ecYafV; EC 3.5.1.3 from Escherichia coli (strain B / BL21-DE3) (see paper)
100% identity, 100% coverage of query (531 bits)
YAFV_YEREN / P0DP67 Omega-amidase YafV; yeYafV; EC 3.5.1.3 from Yersinia enterocolitica (see paper)
66% identity, 100% coverage of query (352 bits)
D2SGH7 nitrilase (EC 3.5.5.1) from Geodermatophilus obscurus (see paper)
38% identity, 94% coverage of query (166 bits)
mtnU / O31664 2-oxoglutaramate:glutamine aminotransferase (EC 3.5.1.3) from Bacillus subtilis (strain 168) (see 4 papers)
MTNU_BACSU / O31664 2-oxoglutaramate amidase; EC 3.5.1.111 from Bacillus subtilis (strain 168) (see 2 papers)
33% identity, 95% coverage of query (134 bits)
A3DHT2 nitrilase (EC 3.5.5.1) from Acetivibrio thermocellus (see paper)
35% identity, 82% coverage of query (126 bits)
YAFV_STAA4 / P0DP65 Omega-amidase YafV; saYafV; EC 3.5.1.3 from Staphylococcus aureus (strain 04-02981) (see paper)
33% identity, 96% coverage of query (119 bits)
ORF77 / Q93NG1 2-ketoglutaramate amidase monomer (EC 3.5.1.3) from Paenarthrobacter nicotinovorans (see 2 papers)
NIT_PAENI / Q93NG1 2-oxoglutaramate amidase; Omega-amidase; EC 3.5.1.111 from Paenarthrobacter nicotinovorans (Arthrobacter nicotinovorans) (see paper)
Q93NG1 2-oxoglutaramate amidase (EC 3.5.1.111) from Paenarthrobacter nicotinovorans (see paper)
34% identity, 86% coverage of query (100 bits)
PfGW456L13_1170 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens GW456-L13
33% identity, 85% coverage of query (92.8 bits)
AO353_07425 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens FW300-N2E3
30% identity, 87% coverage of query (89.0 bits)
Build an alignment for 14358 and 9 homologs with ≥ 30% identity
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davA / Q88QV2 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
Q88QV2 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida (see paper)
29% identity, 96% coverage of query (86.3 bits)
Pf1N1B4_2504 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens FW300-N1B4
31% identity, 95% coverage of query (85.1 bits)
Pf6N2E2_4777 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens FW300-N2E2
33% identity, 96% coverage of query (85.1 bits)
B3IVI7 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas putida (see 4 papers)
28% identity, 96% coverage of query (85.1 bits)
AO356_14225 5-aminopentanamidase (EC 3.5.1.30) from Pseudomonas fluorescens FW300-N2C3
31% identity, 96% coverage of query (82.8 bits)
YCU9_SCHPO / O59829 Probable nitrilase C965.09; EC 3.5.-.- from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast) (see paper)
25% identity, 84% coverage of query (77.8 bits)
ramA / Q75SP7 (R)-amidase (EC 3.5.1.100) from Pseudomonas sp. (see paper)
RSAM_PSESP / Q75SP7 (R)-stereoselective amidase; EC 3.5.1.100 from Pseudomonas sp. (see paper)
Q75SP7 (R)-amidase (EC 3.5.1.100) from Pseudomonas sp. (see paper)
28% identity, 84% coverage of query (77.8 bits)
A0A088BHP3 aryl-acylamidase (EC 3.5.1.13); amidase (EC 3.5.1.4) from Streptomyces sp. (see paper)
26% identity, 96% coverage of query (74.7 bits)
F8AEP0 amidase (EC 3.5.1.4) from Pyrococcus yayanosii (see paper)
24% identity, 91% coverage of query (72.0 bits)
3klcA / Q9UYV8 Crystal structure of hyperthermophilic nitrilase (see paper)
24% identity, 81% coverage of query (68.6 bits)
3klcB Crystal structure of hyperthermophilic nitrilase
24% identity, 81% coverage of query (68.6 bits)
NITR_PYRAB / Q9UYV8 Nitrilase; PaNit; EC 3.5.5.1 from Pyrococcus abyssi (strain GE5 / Orsay) (see 2 papers)
24% identity, 81% coverage of query (67.4 bits)
Q9HVU6 deaminated glutathione amidase (EC 3.5.1.128) from Pseudomonas aeruginosa (see paper)
29% identity, 83% coverage of query (67.0 bits)
NIT2_HUMAN / Q9NQR4 Omega-amidase NIT2; Nitrilase homolog 2; EC 3.5.1.3 from Homo sapiens (Human) (see 4 papers)
Q9NQR4 omega-amidase (EC 3.5.1.3) from Homo sapiens (see paper)
25% identity, 84% coverage of query (66.2 bits)
B8C1M9 nitrilase (EC 3.5.5.1) from Thalassiosira pseudonana (see paper)
27% identity, 84% coverage of query (65.1 bits)
NILP3_ARATH / Q8RUF8 Omega-amidase, chloroplastic; Nitrilase-like protein 3; EC 3.5.1.3 from Arabidopsis thaliana (Mouse-ear cress) (see paper)
Q8RUF8 omega-amidase (EC 3.5.1.3) from Arabidopsis thaliana (see paper)
27% identity, 93% coverage of query (64.3 bits)
NIT3_YEAST / P49954 Omega-amidase NIT3; Nitrilase homolog 2; EC 3.5.1.3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (see 3 papers)
23% identity, 95% coverage of query (62.8 bits)
6ypaB / O58376 The c146a variant of an amidase from pyrococcus horikoshii with bound glutaramide
23% identity, 79% coverage of query (62.4 bits)
7ovgA The c146a variant of an amidase from pyrococcus horikoshii with bound acetamide
23% identity, 79% coverage of query (62.0 bits)
NIT1_SYNYG / P0DP66 Deaminated glutathione amidase; dGSH amidase; Nitrilase homolog 1; syNit1; EC 3.5.1.128 from Synechocystis sp. (strain PCC 6803 / GT-S) (see paper)
P0DP66 deaminated glutathione amidase (EC 3.5.1.128) from Synechocystis sp. PCC 6803 (see paper)
28% identity, 84% coverage of query (61.2 bits)
Q8PXI9 nitrilase (EC 3.5.5.1) from Methanosarcina mazei (see paper)
24% identity, 84% coverage of query (60.5 bits)
B8A0E5 omega-amidase (EC 3.5.1.3) from Zea mays (see paper)
26% identity, 95% coverage of query (59.7 bits)
SGR_6069 / B1W481 4-guanidinobutanamidase (EC 3.5.1.4) from Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) (see 2 papers)
28% identity, 84% coverage of query (57.8 bits)
NIT2_RAT / Q497B0 Omega-amidase NIT2; Nitrilase homolog 2; EC 3.5.1.3 from Rattus norvegicus (Rat) (see 2 papers)
23% identity, 83% coverage of query (56.6 bits)
Nit2 / Q9JHW2 ω-amidase NIT2 monomer (EC 3.5.1.3) from Mus musculus (see 2 papers)
NIT2_MOUSE / Q9JHW2 Omega-amidase NIT2; Nitrilase homolog 2; EC 3.5.1.3 from Mus musculus (Mouse) (see 3 papers)
23% identity, 83% coverage of query (54.7 bits)
A0A0E3D8K7 nitrilase (EC 3.5.5.1); Aliphatic nitrilase (EC 3.5.5.7) from Fusarium proliferatum (see paper)
27% identity, 83% coverage of query (53.9 bits)
pydC / Q846U4 3-amino-isobutyrate synthase (EC 3.5.1.6) from Brevibacillus agri (see paper)
24% identity, 84% coverage of query (52.8 bits)
AMIE_HELPY / O25067 Aliphatic amidase; Acylamide amidohydrolase; EC 3.5.1.4 from Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori) (see 3 papers)
22% identity, 83% coverage of query (47.8 bits)
5h8jB Crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with cadaverine
19% identity, 84% coverage of query (46.2 bits)
5h8iC / G7ITU5 Crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with n-(dihydroxymethyl)putrescine (see paper)
19% identity, 84% coverage of query (46.2 bits)
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Lawrence Berkeley National Laboratory