Searching for up to 100 curated homologs for 14894 FitnessBrowser__Keio:14894 (350 a.a.)

Found high-coverage hits (≥70%) to 12 curated proteins.

Removed hits that are identical to the query, leaving 11

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

gllD / Q88JY0 4-oxalomesaconate tautomerase (EC 5.3.2.8) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
GALD_PSEPK / Q88JY0 4-oxalomesaconate tautomerase; Gallate degradation protein D; EC 5.3.2.8 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) (see paper)
    48% identity, 99% coverage of query (322 bits)

LIGU_NOVK1 / Q0KJL4 (4E)-oxalomesaconate Delta-isomerase; OMA isomerase; 1,3-allylic isomerase LigU; EC 5.3.3.- from Novosphingobium sp. (strain KA1) (Sphingomonas sp. (strain KA1)) (see paper)
    45% identity, 100% coverage of query (305 bits)

6p3hC / Q0KJL4 Crystal structure of ligu(k66m) bound to substrate (see paper)
    45% identity, 100% coverage of query (303 bits)

6p3jB Crystal structure of ligu
    45% identity, 100% coverage of query (303 bits)

ADI1 / A0A0U2X0E4 aconitate-Δ-isomerase 1 (EC 5.3.3.7) from Ustilago maydis (see paper)
ADI1_USTMD / A0A0U2X0E4 Aconitate-delta-isomerase 1; Itaconic acid/2-hydroxyparaconate biosynthesis cluster protein ADI1; EC 5.-.-.- from Ustilago maydis (Corn smut fungus) (see 2 papers)
    45% identity, 99% coverage of query (263 bits)

mii / Q0QLE6 3-methylitaconate Δ-isomerase (EC 5.3.3.6) from Eubacterium barkeri (see 3 papers)
MII_EUBBA / Q0QLE6 3-methylitaconate isomerase; (R)-3-methylitaconate isomerase; 3-methylitaconate delta-isomerase; EC 5.3.3.6 from Eubacterium barkeri (Clostridium barkeri) (see 4 papers)
Q0QLE6 methylitaconate DELTA-isomerase (EC 5.3.3.6) from Eubacterium barkeri (see paper)
    37% identity, 99% coverage of query (229 bits)

PRPF_SHEON / Q8EJW4 2-methyl-aconitate isomerase; Cis-trans isomerase; EC 5.3.3.- from Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) (see 2 papers)
Q8EJW4 aconitate DELTA-isomerase (EC 5.3.3.7) from Shewanella oneidensis (see paper)
    35% identity, 99% coverage of query (169 bits)

5k87A / Q8EJW4 Crystal structure of malonate bound to methylaconitate isomerase prpf from shewanella oneidensis (see paper)
    35% identity, 99% coverage of query (167 bits)

2pw0A Crystal structure of trans-aconitate bound to methylaconitate isomerase prpf from shewanella oneidensis
    35% identity, 99% coverage of query (167 bits)

2pvzA Crystal structure of methylaconitate isomerase prpf from shewanella oneidensis
    35% identity, 99% coverage of query (166 bits)

2pw0B / Q8EJW4 Crystal structure of trans-aconitate bound to methylaconitate isomerase prpf from shewanella oneidensis (see paper)
    36% identity, 99% coverage of query (154 bits)

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