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Searching for up to 100 curated homologs for 15638 FitnessBrowser__Keio:15638 (291 a.a.)

Found high-coverage hits (≥70%) to 17 curated proteins.

Removed hits that are identical to the query, leaving 16

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

4p2vA / P76143 Structure of the ai-2 processing enzyme lsrf in complex with the product of the lsrg reaction p-hpd (see paper)
    100% identity, 97% coverage of query (585 bits)

3gndA Crystal structure of e. Coli lsrf in complex with ribulose-5-phosphate
    99% identity, 96% coverage of query (570 bits)

3glcA Crystal structure of e. Coli lsrf in complex with ribose-5-phosphate
    99% identity, 96% coverage of query (570 bits)

LSRF_SALTY / Q8ZKQ0 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase; EC 2.3.1.245 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see 2 papers)
    90% identity, 100% coverage of query (548 bits)

2qjgA / Q57843 M. Jannaschii adh synthase complexed with f1,6p (see paper)
    32% identity, 87% coverage of query (129 bits)

aroA' / Q57843 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase monomer (EC 4.1.2.13; EC 2.2.1.10) from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (see 3 papers)
ADHS_METJA / Q57843 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase; ADH synthase; ADHS; ADTH synthase; Transaldolase-like ADHS; EC 2.2.1.10 from Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Methanococcus jannaschii) (see 3 papers)
Q57843 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC 2.2.1.10) from Methanocaldococcus jannaschii (see 3 papers)
    32% identity, 87% coverage of query (128 bits)

ADHS_METMP / Q6LZE3 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase; ADH synthase; ADHS; ADTH synthase; EC 2.2.1.10 from Methanococcus maripaludis (strain S2 / LL) (see paper)
    30% identity, 85% coverage of query (115 bits)

Build an alignment

Build an alignment for 15638 and 7 homologs with ≥ 30% identity

Select sequences

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Change minimum %identity:

Additional hits (identity < 30%)

fba / P58314 fructose-1,6-bisphosphate aldolase subunit (EC 4.1.2.13) from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see paper)
    29% identity, 80% coverage of query (103 bits)

P58314 Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
    29% identity, 80% coverage of query (103 bits)

ALF1_HALS3 / B0R3Y0 Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; EC 4.1.2.13 from Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) (see paper)
    26% identity, 81% coverage of query (87.0 bits)

griI / A0JC77 2-amino-4,5-dihydroxy-6-one-heptanoic acid-7-phosphate synthase subunit (EC 4.1.2.56) from Streptomyces griseus (see paper)
GRII_STRGR / A0JC77 2-amino-4,5-dihydroxy-6-oxo-7-(phosphonooxy)heptanoate synthase; EC 4.1.2.56 from Streptomyces griseus (see paper)
A0JC77 2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate synthase (EC 4.1.2.56) from Streptomyces griseus (see paper)
    27% identity, 82% coverage of query (84.0 bits)

ptmB1 / D8L2V7 2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate synthase (EC 4.1.2.56) from Streptomyces platensis (see 4 papers)
    28% identity, 80% coverage of query (84.0 bits)

creI / A0A0K2JKT6 2-amino-4,5-dihydroxy-6-oxo-7-(phosphooxy)heptanoate synthase (EC 4.1.2.56) from Streptomyces cremeus (see paper)
    27% identity, 81% coverage of query (74.3 bits)

ALF1_THETK / P58315 Fructose-bisphosphate aldolase class 1; Fructose-bisphosphate aldolase class I; FBP aldolase; FBPA; EC 4.1.2.13 from Thermoproteus tenax (strain ATCC 35583 / DSM 2078 / JCM 9277 / NBRC 100435 / Kra 1) (see 3 papers)
    26% identity, 82% coverage of query (72.0 bits)

1w8sA The mechanism of the schiff base forming fructose-1,6-bisphosphate aldolase: structural analysis of reaction intermediates
    26% identity, 82% coverage of query (71.6 bits)

2yceE / P58315 Structure of an archaeal fructose-1,6-bisphosphate aldolase with the catalytic lys covalently bound to the carbinolamine intermediate of the substrate. (see paper)
    25% identity, 82% coverage of query (71.2 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory