Sites on a Tree

 

Searching for up to 100 curated homologs for 15863 FitnessBrowser__Keio:15863 (447 a.a.)

Found high-coverage hits (≥70%) to 8 curated proteins.

Removed hits that are identical to the query, leaving 6

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

1yniA Crystal structure of n-succinylarginine dihydrolase, astb, bound to substrate and product, an enzyme from the arginine catabolic pathway of escherichia coli
    100% identity, 98% coverage of query (900 bits)

ASTB_SALTY / Q8ZPU9 N-succinylarginine dihydrolase; EC 3.5.3.23 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (see paper)
    85% identity, 100% coverage of query (794 bits)

BWI76_RS11685 Succinylarginine dihydrolase (EC 3.5.3.23) from Klebsiella michiganensis M5al
    77% identity, 99% coverage of query (686 bits)

Sama_1321 Succinylarginine dihydrolase (EC 3.5.3.23) from Shewanella amazonensis SB2B
    57% identity, 99% coverage of query (513 bits)

Shewana3_1728 Succinylarginine dihydrolase (EC 3.5.3.23) from Shewanella sp. ANA-3
    55% identity, 99% coverage of query (499 bits)

SO2706 Succinylarginine dihydrolase (EC 3.5.3.23) from Shewanella oneidensis MR-1
    54% identity, 99% coverage of query (489 bits)

Build an alignment

Build an alignment for 15863 and 6 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory