Searching for up to 100 curated homologs for 16024 FitnessBrowser__Keio:16024 (403 a.a.)
Found high-coverage hits (≥70%) to 6 curated proteins.
Removed hits that are identical to the query, leaving 5
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
MTR_PSEAB / Q02DS7 Tryptophan-specific transport protein; Tryptophan permease from Pseudomonas aeruginosa (strain UCBPP-PA14) (see paper)
34% identity, 98% coverage of query (225 bits)
Mtr / b3161 tryptophan:H+ symporter Mtr from Escherichia coli K-12 substr. MG1655 (see 7 papers)
mtr / P0AAD2 tryptophan:H+ symporter Mtr from Escherichia coli (strain K12) (see 17 papers)
MTR_ECOLI / P0AAD2 Tryptophan-specific transport protein; Tryptophan permease from Escherichia coli (strain K12) (see 4 papers)
TC 2.A.42.1.2 / P0AAD2 High affinity (3 from Escherichia coli (see 7 papers)
mtr / AAA24183.1 tryptophan-specific permease from Escherichia coli (see paper)
32% identity, 94% coverage of query (199 bits)
TrpP / b3709 tryptophan:H+ symporter TnaB from Escherichia coli K-12 substr. MG1655 (see 4 papers)
tnaB / P23173 tryptophan:H+ symporter TnaB from Escherichia coli (strain K12) (see 5 papers)
TC 2.A.42.1.3 / P23173 Low affinity (70 from Escherichia coli (see 6 papers)
tnaB low affinity tryptophan permease from Escherichia coli K12 (see 7 papers)
33% identity, 100% coverage of query (198 bits)
GLNT2_ALIF1 / Q5E5M9 Glutamine transporter 2 from Aliivibrio fischeri (strain ATCC 700601 / ES114) (Vibrio fischeri) (see paper)
32% identity, 93% coverage of query (168 bits)
Build an alignment for 16024 and 4 homologs with ≥ 30% identity
Or download the sequences
TC 2.A.42.1.6 / Q6M7P5 γ-aminobutyric acid (GABA):Na+ symporter from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
29% identity, 89% coverage of query (67.8 bits)
Or start over
Lawrence Berkeley National Laboratory