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Searching for up to 100 curated homologs for 16795 FitnessBrowser__Keio:16795 (377 a.a.)

Found high-coverage hits (≥70%) to 78 curated proteins.

Removed hits that are identical to the query, leaving 77

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

RURE_ACIAD / P42454 Rubredoxin-NAD(+) reductase; RdxR; EC 1.18.1.1 from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) (see paper)
rubB / RF|YP_045775.1 rubredoxin--NAD(+) reductase; EC 1.18.1.1 from Acinetobacter sp. ADP1 (see 3 papers)
rubB / CAA86926.1 rubredoxin reductase from Acinetobacter baylyi (see 3 papers)
    36% identity, 94% coverage of query (226 bits)

RURE_ALCBS / Q0VTB0 Rubredoxin-NAD(+) reductase; RdxR; EC 1.18.1.1 from Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) (see paper)
Q0VTB0 rubredoxin-NAD+ reductase (EC 1.18.1.1) from Alcanivorax borkumensis (see paper)
    35% identity, 99% coverage of query (222 bits)

RURE_PSEAE / Q9HTK9 Rubredoxin-NAD(+) reductase; RdxR; EC 1.18.1.1 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 3 papers)
    34% identity, 99% coverage of query (209 bits)

2v3aA / Q9HTK9 Crystal structure of rubredoxin reductase from pseudomonas aeruginosa. (see paper)
    34% identity, 99% coverage of query (209 bits)

rubB rubredoxin reductase; EC 1.18.1.1 from Acinetobacter sp. M-1 (see paper)
    34% identity, 94% coverage of query (208 bits)

Build an alignment

Build an alignment for 16795 and 5 homologs with ≥ 30% identity

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Additional hits (identity < 30%)

Q5JHY2 NAD(P)H oxidase (H2O2-forming) (EC 1.6.3.1) from Thermococcus kodakarensis (see paper)
    29% identity, 97% coverage of query (150 bits)

Q5JFZ8 NAD(P)H oxidase (H2O2-forming) (EC 1.6.3.1) from Thermococcus kodakarensis (see 2 papers)
    32% identity, 72% coverage of query (148 bits)

SM_b20984 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Sinorhizobium meliloti 1021
    31% identity, 88% coverage of query (145 bits)

Dshi_1667 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Dinoroseobacter shibae DFL-12
    29% identity, 87% coverage of query (144 bits)

Q6WRS9 nitrite reductase (NADH) (EC 1.7.1.15) from Rhodobacter capsulatus (see paper)
    31% identity, 87% coverage of query (139 bits)

GB|AAB98641.1 NADH oxidase; EC 1.-.-.- from Methanocaldococcus jannaschii DSM 2661 (see paper)
    30% identity, 79% coverage of query (135 bits)

NASD_BACSU / P42435 Nitrite reductase [NAD(P)H]; EC 1.7.1.4 from Bacillus subtilis (strain 168) (see 4 papers)
    27% identity, 95% coverage of query (135 bits)

Q58065 NADH oxidase (H2O2-forming) (EC 1.6.3.3) from Methanocaldococcus jannaschii (see paper)
    30% identity, 79% coverage of query (135 bits)

CCNA_00651 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Caulobacter crescentus NA1000
    30% identity, 86% coverage of query (130 bits)

CA265_RS09995 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Pedobacter sp. GW460-11-11-14-LB5
    27% identity, 83% coverage of query (128 bits)

BWI76_RS17365 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Klebsiella michiganensis M5al
    30% identity, 87% coverage of query (126 bits)

NASB_BACSU / P42433 Assimilatory nitrate reductase electron transfer subunit from Bacillus subtilis (strain 168) (see 3 papers)
    25% identity, 85% coverage of query (125 bits)

ahpH / CAH04397.1 ferredoxin reductase from Mycobacterium sp. HXN-1500 (see paper)
    28% identity, 81% coverage of query (122 bits)

AO353_00805 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Pseudomonas fluorescens FW300-N2E3
    29% identity, 78% coverage of query (122 bits)

nasC / Q48467 nitrate reductase small subunit (EC 1.7.1.2) from Klebsiella oxytoca (see 4 papers)
    29% identity, 87% coverage of query (122 bits)

PfGW456L13_4101 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Pseudomonas fluorescens GW456-L13
    29% identity, 86% coverage of query (121 bits)

Echvi_1912 Nitrate reductase (EC 1.7.99.4) from Echinicola vietnamensis KMM 6221, DSM 17526
    29% identity, 85% coverage of query (119 bits)

Pf6N2E2_2378 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Pseudomonas fluorescens FW300-N2E2
    29% identity, 86% coverage of query (119 bits)

Echvi_1901 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Echinicola vietnamensis KMM 6221, DSM 17526
    27% identity, 83% coverage of query (118 bits)

Psest_1928 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Pseudomonas stutzeri RCH2
    28% identity, 81% coverage of query (118 bits)

1xhcA / Q8U1K9 Nadh oxidase /nitrite reductase from pyrococcus furiosus pfu-1140779- 001
    31% identity, 88% coverage of query (117 bits)

NROR_PYRFU / Q8U1K9 NAD(P)H:rubredoxin oxidoreductase; NROR; Rubredoxin--NAD(P)(+) reductase; EC 1.18.1.4 from Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (see 3 papers)
Q8U1K9 rubredoxin-NAD(P)+ reductase (EC 1.18.1.4) from Pyrococcus furiosus (see paper)
    31% identity, 88% coverage of query (117 bits)

CA265_RS10015 Nitrate reductase (EC 1.7.99.4) from Pedobacter sp. GW460-11-11-14-LB5
    27% identity, 82% coverage of query (117 bits)

1q1wA / P16640 Crystal structure of putidaredoxin reductase from pseudomonas putida (see paper)
    30% identity, 74% coverage of query (117 bits)

camA / P16640 NADH-putidaredoxin reductase (EC 1.18.1.5) from Pseudomonas putida (see 4 papers)
CAMA_PSEPU / P16640 Putidaredoxin reductase CamA; Pdr; Putidaredoxin--NAD(+) reductase; EC 1.18.1.5 from Pseudomonas putida (Arthrobacter siderocapsulatus) (see 4 papers)
P16640 putidaredoxin-NAD+ reductase (EC 1.18.1.5) from Pseudomonas putida (see 9 papers)
    30% identity, 74% coverage of query (116 bits)

6pfzA / O29847 Structure of a NAD-dependent persulfide reductase from a. Fulgidus (see paper)
    27% identity, 79% coverage of query (115 bits)

bedA / Q07946 benzene 1,2-dioxygenase ferredoxin reductase subunit (EC 1.14.12.3) from Pseudomonas putida (see 3 papers)
bedA / AAA17761.1 BedA from Pseudomonas putida (see 3 papers)
    27% identity, 85% coverage of query (114 bits)

tecA4 / O24679 chlorobenzene dioxygenase terminal oxidase ferredoxin reductase subunit (EC 1.14.12.26; EC 1.14.12.18; EC 1.14.12.12) from Cupriavidus sp. (strain PS12) (see 2 papers)
TECA4_CUPXP / O24679 Chlorobenzene dioxygenase, ferredoxin reductase component; EC 1.18.1.3 from Cupriavidus sp. (strain PS12) (see 2 papers)
    28% identity, 73% coverage of query (113 bits)

tcbAd / Q52386 chlorobenzene dioxygenase, NADH-ferredoxin reductase component (EC 1.14.12.26) from Pseudomonas sp. (see 2 papers)
Q52386 chlorobenzene dioxygenase (subunit 1/4) (EC 1.14.12.26) from Pseudomonas sp. P51 (see 2 papers)
    28% identity, 73% coverage of query (113 bits)

bpdA / AAB07753.1 ferrodoxin reductase from Rhodococcus sp. M5 (see paper)
    30% identity, 73% coverage of query (111 bits)

6tukB / Q47QF8 Crystal structure of fdr9 (see paper)
    30% identity, 72% coverage of query (110 bits)

RR42_RS31785 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Cupriavidus basilensis FW507-4G11
    27% identity, 83% coverage of query (109 bits)

N515DRAFT_2362 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Dyella japonica UNC79MFTsu3.2
    31% identity, 79% coverage of query (108 bits)

Q54453 NADH oxidase (H2O-forming) (EC 1.6.3.4) from Streptococcus mutans (see 2 papers)
    30% identity, 71% coverage of query (107 bits)

andAa / Q84BZ0 anthranilate dioxygenase reductase component (EC 1.14.12.1) from Burkholderia cepacia (see paper)
ANDAA_BURCE / Q84BZ0 Anthranilate 1,2-dioxygenase system ferredoxin--NAD(+) reductase component; EC 1.18.1.3 from Burkholderia cepacia (Pseudomonas cepacia) (see paper)
    31% identity, 79% coverage of query (105 bits)

alkT / P17052 rubredoxin-NAD(+) reductase (EC 1.18.1.1) from Pseudomonas oleovorans (see paper)
RURE_PSEOL / P17052 Rubredoxin-NAD(+) reductase; RdxR; EC 1.18.1.1 from Pseudomonas oleovorans (see 3 papers)
alkT / CAB54063.1 rubredoxin reductase from Pseudomonas putida (see 6 papers)
    28% identity, 81% coverage of query (105 bits)

bphA4 / A0A097SRE8 biphenyl 2,3-dioxygenase ferredoxin reductase subunit (EC 1.14.12.18) from Cupriavidus sp. WS (see paper)
    30% identity, 73% coverage of query (104 bits)

padH / Q8L3B0 phenylglyoxylate dehydrogenase (acylating) subunit PadH (EC 1.2.1.58) from Aromatoleum evansii (see 2 papers)
PADH_AROEV / Q8L3B0 NADH-dependent phenylglyoxylate dehydrogenase subunit epsilon; Phenylglyoxylate:NAD oxidoreductase; Phenylglyoxylate:acceptor oxidoreductase; EC 1.2.1.58 from Aromatoleum evansii (Azoarcus evansii) (see paper)
    25% identity, 70% coverage of query (103 bits)

nasB / GB|AAA25099.1 nitrite reductase [NAD(P)H], large subunit from Klebsiella oxytoca (see 2 papers)
    26% identity, 83% coverage of query (103 bits)

picB2 / A0A1X9WE60 6-hydroxypicolinate 3-monooxygenase subunit 2 from Alcaligenes faecalis (see paper)
    29% identity, 74% coverage of query (103 bits)

4emjA / A5W4E9 Complex between the reductase and ferredoxin components of toluene dioxygenase (see paper)
    28% identity, 73% coverage of query (103 bits)

todA / A5W4E9 toluene dioxygenase reductase subunit (EC 1.14.12.11) from Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1) (see paper)
    28% identity, 73% coverage of query (103 bits)

4emiA Toluene dioxygenase reductase in reduced state in complex with NAD+
    28% identity, 72% coverage of query (101 bits)

AZOBR_RS18565 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) from Azospirillum brasilense Sp245
    28% identity, 79% coverage of query (100 bits)

dpaAd / C3UVB8 diphenylamine dioxygenase ferredoxin reductase component from Burkholderia sp. JS667 (see paper)
    30% identity, 73% coverage of query (97.4 bits)

CTMF_CASD6 / W8X9R5 Probable ferredoxin reductase CtmF; EC 1.-.-.- from Castellaniella defragrans (strain DSM 12143 / CCUG 39792 / 65Phen) (Alcaligenes defragrans) (see paper)
    26% identity, 71% coverage of query (97.1 bits)

mdpD / A2SP72 MTBE monooxygenase rubredoxin reductase component from Methylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1) (see 4 papers)
    26% identity, 72% coverage of query (96.7 bits)

YfhY / b2542 putative 3-phenylpropionate/cinnamate dioxygenase ferredoxin reductase subunit (EC 1.14.12.19) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
hcaD / P77650 putative 3-phenylpropionate/cinnamate dioxygenase ferredoxin reductase subunit (EC 1.14.12.19) from Escherichia coli (strain K12) (see 2 papers)
    28% identity, 72% coverage of query (96.7 bits)

8pxkA / Q52437 Structure of nadh-dependent ferredoxin reductase, bpha4, solved at wavelength 5.76 a (see paper)
    29% identity, 71% coverage of query (95.9 bits)

1f3pA Ferredoxin reductase (bpha4)-nadh complex
    29% identity, 71% coverage of query (95.9 bits)

3nt6A / A3QAV3 Structure of the shewanella loihica pv-4 nadh-dependent persulfide reductase c43s/c531s double mutant (see paper)
    28% identity, 75% coverage of query (95.5 bits)

2yvjA Crystal structure of the ferredoxin-ferredoxin reductase (bpha3-bpha4)complex
    29% identity, 71% coverage of query (95.5 bits)

2gr2A Crystal structure of ferredoxin reductase, bpha4 (oxidized form)
    29% identity, 71% coverage of query (95.5 bits)

2gr0A Crystal structure of ferredoxin reductase, bpha4 (oxidized form, NAD+ complex)
    29% identity, 71% coverage of query (95.5 bits)

4h4uA Crystal structure of ferredoxin reductase, bpha4 t176r mutant (reduced form)
    29% identity, 71% coverage of query (95.5 bits)

4h4wA Crystal structure of ferredoxin reductase, bpha4 e175c/t176r/q177g mutant (reduced form)
    29% identity, 71% coverage of query (94.4 bits)

3oc4A / Q833L5 Crystal structure of a pyridine nucleotide-disulfide family oxidoreductase from the enterococcus faecalis v583
    27% identity, 78% coverage of query (89.0 bits)

8c0zE / Q5P142 Cryoem structure of a tungsten-containing aldehyde oxidoreductase from aromatoleum aromaticum (see paper)
    24% identity, 80% coverage of query (87.8 bits)

3cgeA Pyridine nucleotide complexes with bacillus anthracis coenzyme a- disulfide reductase: a structural analysis of dual NAD(p)h specificity
    24% identity, 72% coverage of query (85.5 bits)

3cgdA Pyridine nucleotide complexes with bacillus anthracis coenzyme a- disulfide reductase: a structural analysis of dual NAD(p)h specificity
    24% identity, 72% coverage of query (85.5 bits)

3cgbA / A0A6L7HMK7 Pyridine nucleotide complexes with bacillus anthracis coenzyme a- disulfide reductase: a structural analysis of dual NAD(p)h specificity (see paper)
    24% identity, 72% coverage of query (85.5 bits)

3fg2P / Q6N3B2 Crystal structure of ferredoxin reductase for the cyp199a2 system from rhodopseudomonas palustris (see paper)
    28% identity, 72% coverage of query (82.8 bits)

1f8wA / P37062 Crystal structure of nadh peroxidase mutant: r303m (see paper)
    25% identity, 72% coverage of query (80.9 bits)

2npxA Nadh binding site and catalysis of nadh peroxidase
    25% identity, 72% coverage of query (80.9 bits)

NAPE_ENTFA / P37062 NADH peroxidase; NPXase; Npx; EC 1.11.1.1 from Enterococcus faecalis (strain ATCC 700802 / V583) (see 2 papers)
    25% identity, 72% coverage of query (80.5 bits)

7ytlA Structure of a oxidoreductase in complex with quinone
    27% identity, 74% coverage of query (74.7 bits)

7xpiA / E1BR24 Structure of a oxidoreductase (see paper)
    27% identity, 74% coverage of query (74.7 bits)

NROR_CLOAB / Q9AL95 NADH-rubredoxin oxidoreductase; NROR; NADH:rubredoxin oxidoreductase; EC 1.18.1.1 from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (see 7 papers)
Q9AL95 rubredoxin-NAD+ reductase (EC 1.18.1.1) from Clostridium acetobutylicum (see 2 papers)
    27% identity, 74% coverage of query (73.9 bits)

3kljA / Q9AL95 Crystal structure of nadh:rubredoxin oxidoreductase from clostridium acetobutylicum (see paper)
    27% identity, 74% coverage of query (73.6 bits)

3lxdA / Q2GBV9 Crystal structure of ferredoxin reductase arr from novosphingobium aromaticivorans (see paper)
    27% identity, 71% coverage of query (70.9 bits)

NCPPR_PYRHO / O58308 NAD(P)H coenzyme A polysulfide/persulfide reductase; Coenzyme A disulfide reductase; CoA-disulfide reductase; CoADR; Polysulfide reductase; EC 1.8.1.-; EC 1.8.1.14 from Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (see 3 papers)
O58308 CoA-disulfide reductase (EC 1.8.1.14) from Pyrococcus horikoshii (see paper)
    25% identity, 73% coverage of query (59.3 bits)

4fx9B / O58308 Structure of the pyrococcus horikoshii coa persulfide/polysulfide reductase (see paper)
    25% identity, 73% coverage of query (58.9 bits)

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory