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Searching for up to 100 curated homologs for 18062 FitnessBrowser__Keio:18062 (396 a.a.)

Found high-coverage hits (≥70%) to 100 curated proteins.

Removed hits that are identical to the query, leaving 69

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

BWI76_RS01830 maltose ABC transporter, substrate-binding component MalE from Klebsiella michiganensis M5al
    94% identity, 100% coverage of query (765 bits)

4xajB / P0AEX9,Q9Y466 Crystal structure of human nr2e1/tlx (see paper)
    100% identity, 93% coverage of query (756 bits)

6k7fA / P0AEX9,P53220 Crystal structure of mbpholo-tim21 fusion protein with a 17-residue helical linker (see paper)
    100% identity, 93% coverage of query (753 bits)

4pqkB / B1B3N6,P0AEX9 C-terminal domain of DNA binding protein (see paper)
    100% identity, 93% coverage of query (751 bits)

5azaA / I6V0B8,P0AEX9 Crystal structure of mbp-saglb fusion protein with a 20-residue spacer in the connector helix (see paper)
    100% identity, 93% coverage of query (751 bits)

5z0rB / P0AEX9,Q32ZE1 Structural insight into the zika virus capsid encapsulating the viral genome (see paper)
    100% identity, 93% coverage of query (750 bits)

5az7A / P0AEX9,Q62760 Crystal structure of mbp-tom20 fusion protein with a 4-residue spacer in the connector helix (see paper)
    100% identity, 93% coverage of query (750 bits)

8g3sA / Q07820 Mbp-mcl1 in complex with ligand 11 (see paper)
    100% identity, 93% coverage of query (749 bits)

8qsoA Crystal structure of human mcl-1 in complex with compound 1
    100% identity, 93% coverage of query (749 bits)

8g3xA Mbp-mcl1 in complex with ligand 32
    100% identity, 93% coverage of query (749 bits)

8g3wA Mbp-mcl1 in complex with ligand 28
    100% identity, 93% coverage of query (749 bits)

8g3uA Mbp-mcl1 in complex with ligand 21
    100% identity, 93% coverage of query (749 bits)

8g3tA Mbp-mcl1 in complex with ligand 12
    100% identity, 93% coverage of query (749 bits)

6anvA / L7P7M1,P0AEX9 Crystal structure of anti-crispr protein acrf1 (see paper)
    97% identity, 96% coverage of query (748 bits)

3woaA / P03034,P0AEX9 Crystal structure of lambda repressor (1-45) fused with maltose- binding protein (see paper)
    98% identity, 94% coverage of query (748 bits)

4h1gA / C4YKK8,P0AEX9 Structure of candida albicans kar3 motor domain fused to maltose- binding protein (see paper)
    99% identity, 92% coverage of query (746 bits)

1hsjA / P0AEX9,Q9F0R1 Sarr mbp fusion structure (see paper)
    99% identity, 92% coverage of query (746 bits)

6x91A / P0AEX9,P41238 Crystal structure of mbp-fused human apobec1 (see paper)
    100% identity, 92% coverage of query (746 bits)

4b3nA / P0AEX9,Q0PF16 Crystal structure of rhesus trim5alpha pry/spry domain (see paper)
    99% identity, 92% coverage of query (746 bits)

6x91B Crystal structure of mbp-fused human apobec1
    100% identity, 92% coverage of query (746 bits)

4ozqB / L0N7N1 Crystal structure of the mouse kif14 motor domain (see paper)
    99% identity, 92% coverage of query (745 bits)

3oaiA / P0AEX9,P25189 Crystal structure of the extra-cellular domain of human myelin protein zero (see paper)
    99% identity, 93% coverage of query (745 bits)

3n96A / P0AEX9,Q13324 Crystal structure of human crfr2 alpha extracellular domain in complex with urocortin 1
    100% identity, 93% coverage of query (745 bits)

4kegA / P0AEX9,Q9NP55 Crystal structure of mbp fused human splunc1
    99% identity, 92% coverage of query (745 bits)

5cfvA / P0AEX9 Fusion of maltose-binding protein and pila from acinetobacter nosocomialis m2 (see paper)
    99% identity, 92% coverage of query (745 bits)

3rumA New strategy to analyze structures of glycopeptide antibiotic-target complexes
    100% identity, 93% coverage of query (745 bits)

6pfoA / P30988 Crystal structure of n-glycosylated human calcitonin receptor extracellular domain in complex with salmon calcitonin (16-32) (see paper)
    100% identity, 93% coverage of query (744 bits)

7b01A / P0AEX9,Q76LX8 Adamts13-cub12 (see paper)
    99% identity, 92% coverage of query (744 bits)

5eduB / P0AEX9,Q9UBN7 Crystal structure of human histone deacetylase 6 catalytic domain 2 in complex with trichostatin a (see paper)
    99% identity, 92% coverage of query (743 bits)

4qszA / P0AEX9,P0C872 Crystal structure of mouse jmjd7 fused with maltose-binding protein
    99% identity, 92% coverage of query (743 bits)

8svyA Mbp-mcl1 in complex with ligand 10
    100% identity, 92% coverage of query (743 bits)

3n94A / P0AEX9,P41586 Crystal structure of human pituitary adenylate cyclase 1 receptor- short n-terminal extracellular domain (see paper)
    100% identity, 92% coverage of query (742 bits)

6dd5A / F2K1V9,P0AEX9 Crystal structure of the cas6 domain of marinomonas mediterranea mmb-1 cas6-rt-cas1 fusion protein (see paper)
    99% identity, 92% coverage of query (741 bits)

5c7rA / P0AEX9 Revealing surface waters on an antifreeze protein by fusion protein crystallography (see paper)
    99% identity, 93% coverage of query (741 bits)

3f5fA / P0AEX9,Q76KB1 Crystal structure of heparan sulfate 2-o-sulfotransferase from gallus gallus as a maltose binding protein fusion. (see paper)
    99% identity, 92% coverage of query (741 bits)

5fsgA / P05133,P0AEX9 Structure of the hantavirus nucleoprotein provides insights into the mechanism of RNA encapsidation and a template for drug design (see paper)
    100% identity, 91% coverage of query (741 bits)

3io4C Huntingtin amino-terminal region with 17 gln residues - crystal c90
    99% identity, 92% coverage of query (741 bits)

3ef7A Zp-n domain of mammalian sperm receptor zp3 (crystal form iii)
    99% identity, 92% coverage of query (741 bits)

3d4gE / P0AEX9,P10761 Zp-n domain of mammalian sperm receptor zp3 (crystal form ii) (see paper)
    99% identity, 92% coverage of query (740 bits)

4wmxA The structure of mbp-mcl1 bound to ligand 6 at 2.0a
    99% identity, 92% coverage of query (740 bits)

3mp1A Complex structure of sgf29 and trimethylated h3k4
    99% identity, 92% coverage of query (740 bits)

2v93A Equillibrium mixture of open and partially-closed species in the apo state of maltodextrin-binding protein by paramagnetic relaxation enhancement nmr
    99% identity, 92% coverage of query (740 bits)

3mp8A / P0AEX9,P25554 Crystal structure of sgf29 tudor domain (see paper)
    99% identity, 92% coverage of query (739 bits)

2xz3A / P0AEX9,Q90M13 Blv tm hairpin (see paper)
    99% identity, 92% coverage of query (739 bits)

5jj4A Crystal structure of a variant human activation-induced deoxycytidine deaminase as an mbp fusion protein
    99% identity, 92% coverage of query (739 bits)

3dm0A / O24456,P0AEX9 Maltose binding protein fusion with rack1 from a. Thaliana (see paper)
    98% identity, 92% coverage of query (738 bits)

6gfjA / O43353 Structure of rip2 card domain fused to crystallisable mbp tag (see paper)
    99% identity, 92% coverage of query (738 bits)

3o3uN / P0AEX9,Q15109 Crystal structure of human receptor for advanced glycation endproducts (rage) (see paper)
    99% identity, 92% coverage of query (738 bits)

6sjvA / A0A376KDN7,P06463,Q05086 Structure of hpv18 e6 oncoprotein in complex with mutant e6ap lxxll motif
    98% identity, 92% coverage of query (738 bits)

3hpiA Crystal structure of maltose-binding protein mutant with bound sucrose
    99% identity, 93% coverage of query (738 bits)

8g3yA Mbp-mcl1 in complex with ligand 34
    99% identity, 92% coverage of query (738 bits)

1zjlA Crystal structure of zinc-bound engineered maltose binding protein
    99% identity, 93% coverage of query (738 bits)

4edqA / O70468,P0AEX9 Mbp-fusion protein of myosin-binding protein c residues 149-269
    99% identity, 92% coverage of query (737 bits)

7e29A / P0AEX9,Q04213 Crystal structure of saccharomyces cerevisiae ioc4 pwwp domain fused with mbp (see paper)
    99% identity, 92% coverage of query (737 bits)

7kd4A / P0AEX9,Q91MK1 Structure of thE C-terminal domain of the menangle virus phosphoprotein (residues 329 -388), fused to mbp. Space group p21. (see paper)
    99% identity, 92% coverage of query (737 bits)

4bl8B / P0AEX9,Q9UMX1 Crystal structure of full-length human suppressor of fused (sufu) (see paper)
    99% identity, 92% coverage of query (736 bits)

6ybjA Structure of mbp-mcl-1 in complex with compound 3e
    99% identity, 92% coverage of query (736 bits)

5lofA Crystal structure of the mbp-mcl1 complex with highly selective and potent inhibitor of mcl1
    99% identity, 92% coverage of query (736 bits)

6ybkA Structure of mbp-mcl-1 in complex with compound 4d
    99% identity, 92% coverage of query (736 bits)

6qynA Structure of mbp-mcl-1 in complex with compound 10d
    99% identity, 92% coverage of query (736 bits)

6qyoA Structure of mbp-mcl-1 in complex with compound 18a
    99% identity, 92% coverage of query (736 bits)

4wmwA The structure of mbp-mcl1 bound to ligand 5 at 1.9a
    99% identity, 92% coverage of query (736 bits)

4wmvA Structure of mbp-mcl1 bound to ligand 4 at 2.4a
    99% identity, 92% coverage of query (736 bits)

6slmA / P0AEX9,P17386,Q05086 Crystal structure of full-length hpv31 e6 oncoprotein in complex with lxxll peptide of ubiquitin ligase e6ap (see paper)
    98% identity, 92% coverage of query (735 bits)

6smvA / P0AEX9,P36813,Q92585 Structure of hpv49 e6 protein in complex with maml1 lxxll motif
    98% identity, 92% coverage of query (735 bits)

4egcA / P0AEX9,Q15475 Crystal structure of mbp-fused human six1 bound to human eya2 eya domain (see paper)
    99% identity, 92% coverage of query (735 bits)

7kd5A Structure of thE C-terminal domain of the menangle virus phosphoprotein (residues 329 -388), fused to mbp. Space group p212121
    99% identity, 92% coverage of query (735 bits)

4wgiA A single diastereomer of a macrolactam core binds specifically to myeloid cell leukemia 1 (mcl1)
    99% identity, 92% coverage of query (735 bits)

3py7A / P06931,P0AEX9 Crystal structure of full-length bovine papillomavirus oncoprotein e6 in complex with ld1 motif of paxillin at 2.3a resolution (see paper)
    98% identity, 92% coverage of query (734 bits)

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Build an alignment for 18062 and 69 homologs with ≥ 30% identity

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by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory