Sites on a Tree

 

Searching for up to 100 curated homologs for 18096 FitnessBrowser__Keio:18096 (104 a.a.)

Found high-coverage hits (≥70%) to 5 curated proteins.

Removed hits that are identical to the query, leaving 4

You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.

Hits with ≥ 30% identity

Pf1N1B4_3672 small component of pyruvate transporter (yjcH-like) from Pseudomonas fluorescens FW300-N1B4
    62% identity, 98% coverage of query (128 bits)

PS417_08860 small component of pyruvate transporter (yjcH-like) from Pseudomonas simiae WCS417
    59% identity, 97% coverage of query (124 bits)

Pf6N2E2_5848 small component of pyruvate transporter (yjcH-like) from Pseudomonas fluorescens FW300-N2E2
    58% identity, 98% coverage of query (122 bits)

AZOBR_RS02935 small component of pyruvate transporter (yjcH-like) from Azospirillum brasilense Sp245
    54% identity, 92% coverage of query (105 bits)

Build an alignment

Build an alignment for 18096 and 4 homologs with ≥ 30% identity

Select sequences

Add sequences from UniProt, PDB, RefSeq, or MicrobesOnline (separate identifiers with commas or spaces):

Or download the sequences

Change minimum %identity:

No additional hits (below 30% identity) were found

Or start over

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory