Searching for up to 100 curated homologs for 18145 FitnessBrowser__Keio:18145 (755 a.a.)
Found high-coverage hits (≥70%) to 24 curated proteins.
Removed hits that are identical to the query, leaving 23
You can add additional sequences or change the %identity threshold for inclusion. Once you have selected sequences, you can build an alignment and a tree.
E8X9U7 arginine decarboxylase (EC 4.1.1.19) from Salmonella enterica subsp. enterica serovar Typhimurium (see paper)
93% identity, 100% coverage of query (1501 bits)
5xx1G / Q8Z1P1 Crystal structure of arginine decarboxylase (adia) from salmonella typhimurium (see paper)
90% identity, 100% coverage of query (1427 bits)
6q6iA / Q9I2S7 Lysine decarboxylase a from pseudomonas aeruginosa
40% identity, 100% coverage of query (582 bits)
LDCA_PSEAE / Q9I2S7 Lysine decarboxylase LdcA; EC 4.1.1.18 from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (see 2 papers)
40% identity, 100% coverage of query (580 bits)
Q87KT6 lysine decarboxylase (EC 4.1.1.18) from Vibrio parahaemolyticus (see paper)
37% identity, 97% coverage of query (490 bits)
3n75A / P0A9H3 X-ray crystal structure of the escherichia coli inducible lysine decarboxylase ldci (see paper)
36% identity, 97% coverage of query (478 bits)
LdcI / b4131 lysine decarboxylase 1 (EC 4.1.1.18) from Escherichia coli K-12 substr. MG1655 (see 4 papers)
cadA / P0A9H3 lysine decarboxylase 1 (EC 4.1.1.18) from Escherichia coli (strain K12) (see 64 papers)
LDCI_ECOLI / P0A9H3 Inducible lysine decarboxylase; LDCI; EC 4.1.1.18 from Escherichia coli (strain K12) (see 10 papers)
P0A9H3 lysine decarboxylase (EC 4.1.1.18) from Escherichia coli (see 8 papers)
cadA / RF|NP_418555 lysine decarboxylase, inducible; EC 4.1.1.18 from Escherichia coli K12 (see 18 papers)
36% identity, 97% coverage of query (478 bits)
6q7lA Inducible lysine decarboxylase
36% identity, 97% coverage of query (478 bits)
A0A094XEM2 lysine decarboxylase (EC 4.1.1.18) from Klebsiella aerogenes (see paper)
35% identity, 97% coverage of query (471 bits)
A0A0H3FP92 lysine decarboxylase (EC 4.1.1.18) from Klebsiella aerogenes (see 2 papers)
36% identity, 97% coverage of query (468 bits)
Q9Z4R7 lysine decarboxylase (EC 4.1.1.18) from Eikenella corrodens (see paper)
37% identity, 90% coverage of query (462 bits)
LdcC / b0186 lysine decarboxylase 2 (EC 4.1.1.18) from Escherichia coli K-12 substr. MG1655 (see 15 papers)
ldcC / P52095 lysine decarboxylase 2 (EC 4.1.1.18) from Escherichia coli (strain K12) (see 13 papers)
LDCC_ECOLI / P52095 Constitutive lysine decarboxylase; LDCC; EC 4.1.1.18 from Escherichia coli (strain K12) (see 3 papers)
P52095 lysine decarboxylase (EC 4.1.1.18) from Escherichia coli (see 4 papers)
ldcC / GB|BAA21656.1 lysine decarboxylase, constitutive; EC 4.1.1.18 from Escherichia coli K12 (see 5 papers)
35% identity, 97% coverage of query (457 bits)
Q5ZH57 ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni (see paper)
odc / CAG34069.1 ornithine decarboxylase from Oenococcus oeni (see 2 papers)
33% identity, 89% coverage of query (364 bits)
SpeC / b2965 constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli K-12 substr. MG1655 (see 2 papers)
speC / P21169 constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli (strain K12) (see 14 papers)
P21169 ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli (see paper)
34% identity, 81% coverage of query (360 bits)
H8ZI01 ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis (see paper)
33% identity, 88% coverage of query (349 bits)
A8G927 16S rRNA (adenine1408-N1)-methyltransferase (EC 2.1.1.180) from Streptoalloteichus tenebrarius (see paper)
32% identity, 89% coverage of query (339 bits)
SpeF / b0693 inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli K-12 substr. MG1655 (see 15 papers)
speF / P24169 inducible ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli (strain K12) (see 14 papers)
DCOS_ECOLI / P24169 Inducible ornithine decarboxylase; EC 4.1.1.17 from Escherichia coli (strain K12) (see 2 papers)
32% identity, 88% coverage of query (339 bits)
A4Q8H0 ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens (see paper)
30% identity, 95% coverage of query (338 bits)
1c4kA Ornithine decarboxylase mutant (gly121tyr)
30% identity, 87% coverage of query (325 bits)
1ordA / P43099 Crystallographic structure of a plp-dependent ornithine decarboxylase from lactobacillus 30a to 3.1 angstroms resolution (see paper)
30% identity, 87% coverage of query (322 bits)
P43099 ornithine decarboxylase (EC 4.1.1.17) from Ligilactobacillus saerimneri 30a (see paper)
odci / AAA64830.1 ornithine decarboxylase from Lactobacillus sp (see paper)
30% identity, 87% coverage of query (322 bits)
Build an alignment for 18145 and 21 homologs with ≥ 30% identity
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A0A1V3Y1D0 ornithine decarboxylase (EC 4.1.1.17) from Lactobacillus gasseri (see paper)
28% identity, 82% coverage of query (296 bits)
Q038E5 ornithine decarboxylase (EC 4.1.1.17) from Lacticaseibacillus casei (see paper)
31% identity, 82% coverage of query (279 bits)
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Lawrence Berkeley National Laboratory